Cite this strain

"Lentzea indica" (MTCC 12936, MCC 4127, JCM 33729)

BacDive ID 164639

Type strain

Strain Designation PSKA42

Culture col. no. MTCC 12936 MCC 4127 JCM 33729 PSKA42

NCBI tax ID(s) 2604800

Special Collections JCM Literature strains

History JCM <-- S. Mandal; Univ. Calcutta, India; PSKA42.

Links

"Lentzea indica" PSKA42 is a Gram-positive bacterium that was isolated from Soil from Rangreth.

Gram-positive genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 394491

JCM 33729

@ref 20215

Last LPSN update 2026-05-29 08:45:28

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Pseudonocardiales

Family Pseudonocardiaceae

Genus Lentzea

Species "Lentzea indica"

Full scientific name Lentzea indica Maiti and Mandal 2020

Morphology

Cell morphology

@ref	Motility	Confidence	Gram stain
68108			positive
125438		91

Colony morphology

@ref	Colony color	Medium used
68108	beige to brownish	Benett medium

Pigmentation

@ref	Production	Color	Name
68108		melanoid	melanoid pigment
68108			soluble pigment

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	28
68108	positive	growth	20-30
68108	positive	optimum	26-30

Culture pH

@ref	Ability	Type	PH	PH range
68108	positive	optimum	7
68108	positive	growth	6.0-10.0	alkaliphile

Physiology and metabolism

Halophily

@ref	Salt	Growth	Tested relation	Concentration
68108	NaCl	positive	growth	0.0-3.0 %(w/v)

Observation

@ref	Observation
68108	Whole cell sugars are mannose, ribose and cell wall contain meso diaminopimelic acid
68108	filamentous
68108	colour of aerial mycelium ranges from beige to brownish
68108	aerial and substrate mycelium has been observed
68108	Rod-shaped spore like elements were found

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68108	18305 ChEBI	arbutin	-	degradation
68108		casein	+	degradation
68108	17057 ChEBI	cellobiose	-	builds acid from
68108	17108 ChEBI	D-arabinose	-	assimilation
68108	15824 ChEBI	D-fructose	+	carbon source
68108	12936 ChEBI	D-galactose	+	carbon source
68108	17634 ChEBI	D-glucose	+	carbon source
68108	65327 ChEBI	D-xylose	+	carbon source
68108	4853 ChEBI	esculin	+	degradation
68108	28757 ChEBI	fructose	-	builds acid from
68108	16813 ChEBI	galactitol	-	assimilation
68108	28260 ChEBI	galactose	-	builds acid from
68108	5291 ChEBI	gelatin	+	degradation
68108	17234 ChEBI	glucose	-	builds acid from
68108	17368 ChEBI	hypoxanthine	-	degradation
68108	16977 ChEBI	L-alanine	+	nitrogen source
68108	30849 ChEBI	L-arabinose	-	builds acid from
68108	16467 ChEBI	L-arginine	+	nitrogen source
68108	17196 ChEBI	L-asparagine	+	nitrogen source
68108	62345 ChEBI	L-rhamnose	+	carbon source
68108	17716 ChEBI	lactose	+	carbon source
68108	17306 ChEBI	maltose	+	carbon source
68108	17306 ChEBI	maltose	-	builds acid from
68108	29864 ChEBI	mannitol	-	builds acid from
68108	37684 ChEBI	mannose	-	builds acid from
68108	6731 ChEBI	melezitose	-	assimilation
68108	28053 ChEBI	melibiose	+	carbon source
68108	17268 ChEBI	myo-inositol	+	carbon source
68108	17268 ChEBI	myo-inositol	-	builds acid from
68108	15361 ChEBI	pyruvate	+	carbon source
68108	16634 ChEBI	raffinose	+	carbon source
68108	16634 ChEBI	raffinose	-	builds acid from
68108	26546 ChEBI	rhamnose	-	builds acid from
68108	15963 ChEBI	ribitol	+	carbon source
68108	15963 ChEBI	ribitol	-	builds acid from
68108	28017 ChEBI	starch	-	degradation
68108	17992 ChEBI	sucrose	+	carbon source
68108	17992 ChEBI	sucrose	-	builds acid from
68108	27082 ChEBI	trehalose	-	builds acid from
68108	18186 ChEBI	tyrosine	-	degradation
68108	16199 ChEBI	urea	+	degradation
68108	18222 ChEBI	xylose	-	builds acid from

Antibiotic resistance

@ref	ChEBI	Group ID	Metabolite	Resistance conc.	Sensitivity conc.
68108	2676	10	amoxicillin	20 µg (disc)
68108	161680		aztreonam	30 µg (disc)
68108	474053		cefazolin		30 µg (disc)
68108	478164		cefepime		30 µg (disc)
68108	3493		cefoperazone		75 µg (disc)
68108	209807		cefoxitin	30 µg (disc)
68108	3515		cefuroxime		30 µg (disc)
68108	17698		chloramphenicol		30 µg (disc)
68108	100241		ciprofloxacin		5 µg (disc)
68108	48947	10	clavulanic acid	10 µg (disc)
68108	3745		clindamycin		2 µg (disc)
68108	3770		co-trimoxazole		25 µg (disc)
68108	37943		colistin		10 µg (disc)
68108	17833		gentamicin		10 µg (disc)
68108	63598		levofloxacin		5 µg (disc)
68108	6472		lincomycin		15 µg (disc)
68108	71415		nitrofurantoin		30 µg (disc)
68108	100246		norfloxacin		10 µg (disc)
68108	28368		novobiocin		30 µg (disc)
68108	16869		oleandomycin		15 µg (disc)
68108	18208		penicillin g	10 Unit (disc)
68108	8309		polymyxin b		30 µg (disc)
68108	28077		rifampicin		30 µg (disc)
68108	17076		streptomycin		25 µg (disc)
68108	27902		tetracycline		30 µg (disc)
68108	28864		tobramycin		10 µg (disc)
68108	28001		vancomycin		30 µg (disc)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68108	16136 ChEBI	hydrogen sulfide

Enzymes

@ref	Value	Activity	Ec
68108	amylase	+
68108	caseinase	+	3.4.21.50
68108	catalase	+	1.11.1.6
68108	cellulase	+	3.2.1.4
68108	gelatinase	+
68108	lipase	+
68108	phosphatase	-
68108	urease	-	3.5.1.5

Isolation, sampling and environmental information

Isolation

@ref	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude	Sample type
67770		Srinagar, Jammu and Kashmir	India	IND	Asia			Soil from Rangreth
68108	2013-12-06	Rangreth, Srinagar, Jammu and Kashmir	India	IND	Asia	48.1373	11.5756 48.1373/11.5756

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM1218438v1 assembly for Lentzea indica PSKA42	scaffold	GCA_012184385	2604800.3	2893079116	2604800	0

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
68108	Lentzea indica strain PSKA42 16S ribosomal RNA gene, partial sequence	MH299826	1453		2604800

GC content

@ref	GC-content (mol%)	Method
68108	68.33	genome sequence analysis
67770	68.3	genome sequence analysis

Genome-based predictions

Predictions

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Lentzea indica PSKA42
NCBI: GCA_012184385.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	89.24	no
125438	anaerobic	anaerobicⓘ	no	97.64	no
125438	aerobic	aerobicⓘ	yes	83.38	no
125438	spore-forming	spore-formingⓘ	yes	80.51	no
125438	thermophilic	thermophileⓘ	no	96.50	yes
125438	flagellated	motile2+ⓘ	no	91.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Lentzea indica sp. nov., a novel actinobacteria isolated from Indian Himalayan-soil.	Maiti PK, Mandal S	Antonie Van Leeuwenhoek	10.1007/s10482-020-01449-8	2020

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68108	Pulak Kumar Maiti, Sukhendu Mandal: Lentzea indica sp. nov., a novel actinobacteria isolated from Indian Himalayan-soil. Antonie Van Leeuwenhoek 113: 1411 - 1423 2020 ( DOI 10.1007/s10482-020-01449-8 )
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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"Lentzea indica" (MTCC 12936, MCC 4127, JCM 33729)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Pigmentation

Culture and growth conditions

Culture temp

Culture pH

Physiology and metabolism

Halophily

Observation

Metabolite utilization

Antibiotic resistance

Metabolite production

Enzymes

Isolation, sampling and environmental information

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_012184385

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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