Name: Weissella coleopterorum JCM 33684
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 164632

Type strain:

Species: Weissella coleopterorum

Culture col. no.: JCM 33684, KACC 21347, KCTC 43114

Strain history: D.-W. Hyun; Kyung Hee Univ., South Korea; HDW19.

NCBI tax ID(s): 2714949 (species)

Section

Weissella coleopterorum JCM 33684 is a mesophilic bacterium that was isolated from Intestine of the diving beetle Cybister lewisianus.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Lactobacillales*
	Family	*Lactobacillaceae*
	Genus	*Weissella*
	Species	**Weissella coleopterorum**
	Full Scientific Name (LPSN)	Weissella coleopterorum Hyun et al. 2021

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	25 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Intestine of the diving beetle Cybister lewisianus
[Ref.: #67770]	Host species	Cybister lewisianus
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Weissella sp. strain HDW19 16S ribosomal RNA gene, partial sequence	MN099422	1503	ENA	2714949 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Weissella coleopterorum HDW19	GCA_011304355	complete	GenBank	2714949 tax ID
[Ref.: #66792]	Weissella sp. HDW19	2714949.3	complete	PATRIC	2714949 tax ID	*

[Ref.: #67770]

GC-content

37.2 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Weissella sp. HDW19 PATRIC: 2714949.3
[Ref.: #69480]	motile	no	95.811	no
[Ref.: #69480]	gram-positive	yes	93.914	no
[Ref.: #69480]	anaerobic	no	89.923	no
[Ref.: #69480]	halophile	yes	93.302	no
[Ref.: #69480]	spore-forming	no	96.957	no
[Ref.: #69480]	glucose-util	yes	92.868	no
[Ref.: #69480]	aerobic	no	95.25	no
[Ref.: #69480]	thermophile	no	99.589	yes
[Ref.: #69480]	flagellated	no	98.857	no
[Ref.: #69480]	glucose-ferment	yes	88.737	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 33684, KACC 21347, KCTC 43114

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Brevilactibacter coleopterorum sp. nov., isolated from the intestine of the dark diving beetle Hydrophilus acuminatus, and Weissella coleopterorum sp. nov., isolated from the intestine of the diving beetle Cybister lewisianus.	Hyun DW, Lee JY, Sung H, Kim PS, Jeong YS, Lee JY, Yun JH, Choi JW, Han JE, Lee SY, Tak EJ, Kim HS, Bae JW	Int J Syst Evol Microbiol	10.1099/ijsem.0.004779	2021	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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Weissella sp. HDW19

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