Name: Paracoccus aurantiacus JCM 33630
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 164615

Type strain:

Species: Paracoccus aurantiacus

Culture col. no.: JCM 33630, CGMCC 1.13898

Strain history: D. Lin; Inst. of Mar. Microbes & Ecosphere (IME), Xiamen Univ., China; TK008.

NCBI tax ID(s): 2599412 (species)

Section

Paracoccus aurantiacus JCM 33630 is a mesophilic bacterium that was isolated from Seawater in shallow-sea hydrothermal systems off Kueishantao Island.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodobacterales*
	Family	*Paracoccaceae*
	Genus	*Paracoccus*
	Species	**Paracoccus aurantiacus**
	Full Scientific Name (LPSN)	Paracoccus aurantiacus Ye et al. 2020

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	25 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Seawater in shallow-sea hydrothermal systems off Kueishantao Island
[Ref.: #67770]	Country	Taiwan
[Ref.: #67770]	Country ISO 3 Code	TWN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Paracoccus sp. TK008 16S ribosomal RNA gene, partial sequence	MN708965	1459	ENA	2599412 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Paracoccus aurantiacus TK008	GCA_007993065	contig	GenBank	2599412 tax ID

[Ref.: #67770]

GC-content

62.54 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Paracoccus aurantiacus TK008 NCBI: GCA_007993065.1
[Ref.: #69480]	motile	no	59.563	no
[Ref.: #69480]	flagellated	no	82.344	no
[Ref.: #69480]	gram-positive	no	96.855	no
[Ref.: #69480]	anaerobic	no	98.981	no
[Ref.: #69480]	aerobic	yes	87.357	no
[Ref.: #69480]	halophile	no	53.412	no
[Ref.: #69480]	spore-forming	no	97.259	no
[Ref.: #69480]	glucose-util	yes	86.699	no
[Ref.: #69480]	thermophile	no	96.142	yes
[Ref.: #69480]	glucose-ferment	no	88.625	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 33630, CGMCC 1.13898

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Paracoccus aurantiacus sp. nov., isolated from shallow-sea hydrothermal systems off Kueishantao Island.	Ye J, Lin D, Zhang M, Lin TH, Sun J, Wang D, Tang K	Int J Syst Evol Microbiol	10.1099/ijsem.0.004068	2020	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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Paracoccus aurantiacus TK008

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