Name: Acinetobacter chengduensis WCHAc060005
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 164592

Type strain:

Species: Acinetobacter chengduensis

Strain Designation: WCHAc060005

Culture col. no.: JCM 33509, CCTCC AB 2019139, GDMCC 1.1622

Strain history: Z. Zong; West China Hosp., China; WCHAc060005.

NCBI tax ID(s): 2420890 (species)

Section

Acinetobacter chengduensis WCHAc060005 is an obligate aerobe, mesophilic, Gram-negative bacterium that was isolated from Hospital sewage from influx mainstream of the wastewater treatment plant at West China Hospital in June 2018.

coccus-shaped
Gram-negative
mesophilic
obligate aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Pseudomonadales*
	Family	*Moraxellaceae*
	Genus	*Acinetobacter*
	Species	**Acinetobacter chengduensis**
	Full Scientific Name (LPSN)	Acinetobacter chengduensis Qin et al. 2020

Information on morphological and physiological properties Morphology

[Ref.: #69622]	Gram stain	negative

[Ref.: #69622]	Cell shape	coccus-shaped

[Ref.: #69622]	Motility	no

Information on culture and growth conditions Culture and growth conditions

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Culture medium

brain heart infusion

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Culture medium growth

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Culture medium

LB medium

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Culture medium growth

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Culture medium composition

expand / minimize

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Culture medium

Acinetobacter agar

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Culture medium growth

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Culture medium

TSB

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Culture medium growth

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C
[Ref.: #69622]			growth	20-37 °C

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Temperature range

mesophilic

	pH	Kind of pH		pH
[Ref.: #69622]			growth	5-9

Information on physiology and metabolism Physiology and metabolism

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Oxygen tolerance

obligate aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #69622]		NaCl		growth	0.5-1.5	%(w/v)
[Ref.: #69622]		NaCl		other	2.5	%(w/v)

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Observation

haemolysis on sheep blood agar

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #69622]	2,3-butanediol ChEBI	+	assimilation
[Ref.: #69622]	4-aminobutyrate ChEBI	+	assimilation
[Ref.: #69622]	4-hydroxybenzoate ChEBI	+	assimilation
[Ref.: #69622]	4-oxopentanoate ChEBI	+	assimilation
[Ref.: #69622]	acetate ChEBI	+	assimilation
[Ref.: #69622]	adipate ChEBI	+	assimilation
[Ref.: #69622]	benzoate ChEBI	+	assimilation
[Ref.: #69622]	beta-alanine ChEBI	+	assimilation
[Ref.: #69622]	citraconate ChEBI	+	assimilation
[Ref.: #69622]	citrate ChEBI	+	assimilation
[Ref.: #69622]	D-gluconate ChEBI	+	assimilation
[Ref.: #69622]	D-glucose ChEBI	-	builds acid from
[Ref.: #69622]	D-malate ChEBI	+	assimilation
[Ref.: #69622]	D-ribose ChEBI	+	assimilation
[Ref.: #69622]	ethanol ChEBI	+	assimilation
[Ref.: #69622]	gelatin ChEBI	-	hydrolysis
[Ref.: #69622]	gentisate ChEBI	+	assimilation
[Ref.: #69622]	glutarate ChEBI	+	assimilation
[Ref.: #69622]	histamine ChEBI	+	assimilation
[Ref.: #69622]	L-arabinose ChEBI	+	assimilation
[Ref.: #69622]	L-arginine ChEBI	+	assimilation
[Ref.: #69622]	L-aspartate ChEBI	+	assimilation
[Ref.: #69622]	L-glutamate ChEBI	+	assimilation
[Ref.: #69622]	L-histidine ChEBI	+	assimilation
[Ref.: #69622]	L-leucine ChEBI	+	assimilation
[Ref.: #69622]	L-ornithine ChEBI	+	assimilation
[Ref.: #69622]	L-phenylalanine ChEBI	+	assimilation
[Ref.: #69622]	L-tartrate ChEBI	+	assimilation
[Ref.: #69622]	lactate ChEBI	+	assimilation
[Ref.: #69622]	malonate ChEBI	+	assimilation
[Ref.: #69622]	nitrate ChEBI	-	reduction
[Ref.: #69622]	phenylacetate ChEBI	+	assimilation
[Ref.: #69622]	putrescine ChEBI	+	assimilation
[Ref.: #69622]	trans-aconitate ChEBI	+	assimilation
[Ref.: #69622]	tricarballylate ChEBI	+	assimilation
[Ref.: #69622]	trigonelline ChEBI	+	assimilation
[Ref.: #69622]	tryptamine ChEBI	+	assimilation
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Antibiotic sensitivity	Concentration		Antibiotic resistance	Concentration
[Ref.: #69622]	amikacin ChEBI	yes	1	µg/mL
[Ref.: #69622]	ciprofloxacin ChEBI				yes	8	µg/mL
[Ref.: #69622]	gentamicin ChEBI	yes	0.5	µg/mL
[Ref.: #69622]	tigecycline ChEBI	yes	0.5	µg/mL

	Antibiotica	Group ID of combined antibiotics	Metabolite	Antibiotic sensitivity	Concentration
[Ref.: #69622]		26	sulfamethoxazole ChEBI	yes	0.5	µg/mL
[Ref.: #69622]		26	trimethoprim ChEBI	yes	0.25	µg/mL

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #69622]		catalase	+	1.11.1.6
[Ref.: #69622]		cytochrome oxidase	-	1.9.3.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Hospital sewage from influx mainstream of the wastewater treatment plant at West China Hospital in June 2018
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia

[Ref.: #69622]	Sample type/isolated from	Hospital sewage
[Ref.: #69622]	Sampling date	2018-06-24
[Ref.: #69622]	Geographic location (country and/or sea, region)	Chengdu, Sichuan
[Ref.: #69622]	Country	China
[Ref.: #69622]	Country ISO 3 Code	CHN
[Ref.: #69622]	Continent	Asia
[Ref.: #69622]	Geographic location	30.6667°/104.0670°
[Ref.: #69622]	Enrichment culture	nutrient broth
[Ref.: #69622]	Enrichment culture duration	overnight
[Ref.: #69622]	Enrichment culture temperature	30 ̊C
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Acinetobacter sp. strain WCHAc060005 16S ribosomal RNA gene, partial sequence	MK796535	1532	ENA	2420890 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Acinetobacter chengduensis WCHAc060005	GCA_003664645	contig	GenBank	2420890 tax ID
[Ref.: #69622]	Whole genome shotgun	RCHC00000000		GenBank	2420890 tax ID

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GC-content

39.9 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Acinetobacter chengduensis WCHAc060005 NCBI: GCA_003664645.1
[Ref.: #69480]	flagellated	no	95.311	no
[Ref.: #69480]	gram-positive	no	97.781	no
[Ref.: #69480]	anaerobic	no	98.609	no
[Ref.: #69480]	aerobic	yes	90.396	no
[Ref.: #69480]	halophile	no	87.101	no
[Ref.: #69480]	spore-forming	no	96.883	no
[Ref.: #69480]	glucose-util	no	86.572	no
[Ref.: #69480]	thermophile	no	99.916	yes
[Ref.: #69480]	motile	no	92.014	no
[Ref.: #69480]	glucose-ferment	no	91.579	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 33509, CCTCC AB 2019139, GDMCC 1.1622

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Characterization of Acinetobacter chengduensis sp. nov., isolated from hospital sewage and capable of acquisition of carbapenem resistance genes.	Qin J, Feng Y, Lu X, Zong Z	Syst Appl Microbiol	10.1016/j.syapm.2020.126092	2020	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69622

Jiayuan Qin, Yu Feng, Xiaoju Lü, Zhiyong Zong: Characterization of Acinetobacter chengduensis sp. nov., isolated from hospital sewage and capable of acquisition of carbapenem resistance genes. Syst Appl Microbiol. 43: 2020 ( DOI 10.1016/j.syapm.2020.126092 )

* These data were automatically processed and therefore are not curated

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