Name: Tsukamurella conjunctivitidis JCM 33389
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 164541

Type strain:

Species: Tsukamurella conjunctivitidis

Culture col. no.: JCM 33389, DSM 109108

Strain history: J. L. L. Teng; Dept. of Microbiol., Univ. of Hong Kong, China; HKU72.

NCBI tax ID(s): 2592068 (species)

Section

Tsukamurella conjunctivitidis JCM 33389 is a mesophilic bacterium that was isolated from Conjunctival swab of a patient with conjunctivitis in Hong Kong.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	07-12-2022 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Mycobacteriales*
	Family	*Tsukamurellaceae*
	Genus	*Tsukamurella*
	Species	**Tsukamurella conjunctivitidis**
	Full Scientific Name (PNU)	Tsukamurella conjunctivitidis Teng et al. 2020

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	37 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-9

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Conjunctival swab of a patient with conjunctivitis in Hong Kong
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence MK583684 (>99% sequence identity) for Tsukamurella from Microbeatlas

Aquatic Samples	2978
Soil Samples	3431
Animal Samples	5160
Plant Samples	790
Total Samples	12359

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Tsukamurella conjunctivitidis 16S ribosomal RNA gene, partial sequence	MK583684	1407	ENA	2592068 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Tsukamurella conjunctivitidis HKU72	GCA_007858475	contig	GenBank	2592068 tax ID

[Ref.: #67770]

GC-content

70.5 mol%

genome sequence analysis

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 33389, DSM 109108

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Tsukamurella asaccharolytica sp. nov., Tsukamurella conjunctivitidis sp. nov. and Tsukamurella sputi sp. nov., isolated from patients with bacteraemia, conjunctivitis and respiratory infection in Hong Kong.	Teng JLL, Fong JYH, Fok KMN, Lee HH, Chiu TH, Tang Y, Ngan AHY, Wong SSY, Que TL, Lau SKP, Woo PCY	Int J Syst Evol Microbiol	10.1099/ijsem.0.003861	2020	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Tsukamurella conjunctivitidis in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF