Name: Segatella hominis JCM 33280
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 164500

Type strain:

Species: Segatella hominis

Culture col. no.: JCM 33280, BCRC 81118

Strain history: C.-H. Huang; BCRC, FIRDI, Taiwan; gm001.

NCBI tax ID(s): 2518605 (species)

Section

Segatella hominis JCM 33280 is an anaerobe, mesophilic, Gram-negative bacterium that was isolated from Fecal sample of a healthy 34-year- old Taiwanese male.

Gram-negative
anaerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Bacteroidia*
	Order	*Bacteroidales*
	Family	*Prevotellaceae*
	Genus	*Segatella*
	Species	**Segatella hominis**
	Full Scientific Name (LPSN)	Segatella hominis (Liou et al. 2020) Hitch et al. 2023

Synonym

Prevotella hominis

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %100

[Ref.: #69480]	Motility	no Confidence in %90.244

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	37 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Oxygen tolerance

anaerobe Confidence in %100

[Ref.: #69480]	Ability of spore formation	no Confidence in %99.999
[Ref.: #69481]	Ability of spore formation	no Confidence in %100

[Ref.: #67770]

Observation

quinones: MK-11, MK-12

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Fecal sample of a healthy 34-year- old Taiwanese male
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Prevotella hominis strain BCRC 81118 16S ribosomal RNA gene, partial sequence	MK567960	1484	ENA	2518605 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Prevotella hominis BCRC 81118	GCA_004535825	contig	GenBank	2518605 tax ID
[Ref.: #66792]	Prevotella sp. BCRC 81118	2518605.3	wgs	PATRIC	2518605 tax ID	*
[Ref.: #66792]	Prevotella hominis BCRC 81118	2903623619	draft	JGI IMG/M	2518605 tax ID	*

[Ref.: #67770]

GC-content

42.9 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Prevotella sp. BCRC 81118 PATRIC: 2518605.3
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Prevotella sp. BCRC 81118 PATRIC: 2518605.3
[Ref.: #69480]	motile	no	89.685	no
[Ref.: #69480]	gram-positive	no	96.597	no
[Ref.: #69480]	anaerobic	yes	98.952	no
[Ref.: #69480]	aerobic	no	98.329	no
[Ref.: #69480]	halophile	no	92.153	no
[Ref.: #69480]	spore-forming	no	95.857	no
[Ref.: #69480]	glucose-util	yes	85.401	no
[Ref.: #69480]	flagellated	no	96.347	no
[Ref.: #69480]	thermophile	no	97.609	yes
[Ref.: #69480]	glucose-ferment	yes	69.058	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 33280, BCRC 81118

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Prevotella hominis sp. nov., isolated from human faeces.	Liou JS, Huang CH, Ikeyama N, Lee AY, Chen IC, Blom J, Chen CC, Chen CH, Lin YC, Hsieh SY, Huang L, Ohkuma M, Watanabe K, Sakamoto M	Int J Syst Evol Microbiol	10.1099/ijsem.0.004342	2020	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

* These data were automatically processed and therefore are not curated

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Prevotella sp. BCRC 81118

Prevotella sp. BCRC 81118

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