Name: Lacticaseibacillus daqingensis JCM 33273
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 164494

Type strain:

Species: Lacticaseibacillus daqingensis

Culture col. no.: JCM 33273, CCM 8948, CCTCC 2018390, NCIMB 15173

Strain history: C. T. Gu; Coll. of Life Sci., Northeast Agric. Univ., China; 143-4(a).

NCBI tax ID(s): 2486014 (species)

Section

Lacticaseibacillus daqingensis JCM 33273 is a mesophilic bacterium that was isolated from Traditional pickle in Heilongjiang Province.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Lactobacillales*
	Family	*Lactobacillaceae*
	Genus	*Lacticaseibacillus*
	Species	**Lacticaseibacillus daqingensis**
	Full Scientific Name (LPSN)	Lacticaseibacillus daqingensis (Long et al. 2020) Zheng et al. 2020

Synonym

Lactobacillus daqingensis

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Traditional pickle in Heilongjiang Province
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Lactobacillus sp. strain 143-4(a) 16S ribosomal RNA gene, partial sequence	MK110842	1429	ENA	2486014 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Lacticaseibacillus daqingensis 143-4(a)	GCA_003946115	contig	GenBank	2486014 tax ID

[Ref.: #67770]

GC-content

58 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Lacticaseibacillus daqingensis 143-4(a) NCBI: GCA_003946115.1
[Ref.: #69480]	motile	no	94.429	no
[Ref.: #69480]	flagellated	no	97.909	no
[Ref.: #69480]	gram-positive	yes	94.508	no
[Ref.: #69480]	anaerobic	no	91.003	no
[Ref.: #69480]	aerobic	no	98.66	no
[Ref.: #69480]	halophile	yes	80.973	no
[Ref.: #69480]	spore-forming	no	94.652	no
[Ref.: #69480]	glucose-util	yes	92.805	no
[Ref.: #69480]	thermophile	no	98.845	yes
[Ref.: #69480]	glucose-ferment	yes	88.3	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 33273, CCM 8948, CCTCC 2018390, NCIMB 15173

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Lacticaseibacillus absianus sp. nov., isolated from the cecum of a mini-pig.	Bai L, Paek J, Shin Y, Park HY, Chang YH	Int J Syst Evol Microbiol	10.1099/ijsem.0.004752	2021	*
Phylogeny	Lactobacillus hegangensis sp. nov., Lactobacillus suibinensis sp. nov., Lactobacillus daqingensis sp. nov., Lactobacillus yichunensis sp. nov., Lactobacillus mulanensis sp. nov., Lactobacillus achengensis sp. nov., Lactobacillus wuchangensis sp. nov., Lactobacillus gannanensis sp. nov., Lactobacillus binensis sp. nov. and Lactobacillus angrenensis sp. nov., isolated from Chinese traditional pickle and yogurt.	Long GY, Wei YX, Tu W, Gu CT	Int J Syst Evol Microbiol	10.1099/ijsem.0.004060	2020	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Lacticaseibacillus daqingensis in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF

Lacticaseibacillus daqingensis 143-4(a)

Change proposal

Change proposal