Name: Lacticaseibacillus yichunensis JCM 33272
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 164493

Type strain:

Species: Lacticaseibacillus yichunensis

Culture col. no.: JCM 33272, CCM 8947, CCTCC 2018405, NCIMB 15169

Strain history: C. T. Gu; Coll. of Life Sci., Northeast Agric. Univ., China; 33-1.

NCBI tax ID(s): 2486015 (species)

Section

Lacticaseibacillus yichunensis JCM 33272 is a mesophilic bacterium that was isolated from Traditional pickle in Heilongjiang Province.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Lactobacillales*
	Family	*Lactobacillaceae*
	Genus	*Lacticaseibacillus*
	Species	**Lacticaseibacillus yichunensis**
	Full Scientific Name (LPSN)	Lacticaseibacillus yichunensis (Long et al. 2020) Zheng et al. 2020

Synonym

Lactobacillus yichunensis

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Traditional pickle in Heilongjiang Province
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Lactobacillus sp. strain 33-1 16S ribosomal RNA gene, partial sequence	MK110845	1442	ENA	2486015 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Lacticaseibacillus yichunensis 33-1	GCA_003946405	contig	GenBank	2486015 tax ID

[Ref.: #67770]

GC-content

55.4 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Lacticaseibacillus yichunensis 33-1 NCBI: GCA_003946405.1
[Ref.: #69480]	motile	no	93.567	no
[Ref.: #69480]	flagellated	no	97.501	no
[Ref.: #69480]	gram-positive	yes	94.526	no
[Ref.: #69480]	anaerobic	no	96.462	no
[Ref.: #69480]	aerobic	no	96.854	no
[Ref.: #69480]	halophile	yes	81.881	no
[Ref.: #69480]	spore-forming	no	91.527	no
[Ref.: #69480]	glucose-util	yes	92.13	no
[Ref.: #69480]	thermophile	no	99.306	yes
[Ref.: #69480]	glucose-ferment	yes	87.923	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 33272, CCM 8947, CCTCC 2018405, NCIMB 15169

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Lactobacillus hegangensis sp. nov., Lactobacillus suibinensis sp. nov., Lactobacillus daqingensis sp. nov., Lactobacillus yichunensis sp. nov., Lactobacillus mulanensis sp. nov., Lactobacillus achengensis sp. nov., Lactobacillus wuchangensis sp. nov., Lactobacillus gannanensis sp. nov., Lactobacillus binensis sp. nov. and Lactobacillus angrenensis sp. nov., isolated from Chinese traditional pickle and yogurt.	Long GY, Wei YX, Tu W, Gu CT	Int J Syst Evol Microbiol	10.1099/ijsem.0.004060	2020	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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Lacticaseibacillus yichunensis 33-1

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