Name: Marinobacter halodurans JCM 33109
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 164453

Type strain:

Species: Marinobacter halodurans

Culture col. no.: JCM 33109, KACC 19883, KCTC 62937

Strain history: B. S. Kim; Korea Univ., South Korea; YJ-S3-2.

NCBI tax ID(s): 2528979 (species)

Section

Marinobacter halodurans JCM 33109 is a mesophilic bacterium that was isolated from Sediment of a saltern in Yongyu-do.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Alteromonadales*
	Family	*Alteromonadaceae*
	Genus	*Marinobacter*
	Species	**Marinobacter halodurans**
	Full Scientific Name (LPSN)	Marinobacter halodurans Yoo et al. 2020

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: Q-9

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Sediment of a saltern in Yongyu-do
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Marinobacter sp. YJ-S3-2 16S ribosomal RNA gene, partial sequence	MK568065	1446	ENA	2528979 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Marinobacter halodurans YJ-S3-2	GCA_004327985	contig	GenBank	2528979 tax ID

[Ref.: #67770]

GC-content

60.9 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Marinobacter halodurans YJ-S3-2 NCBI: GCA_004327985.1
[Ref.: #69480]	motile	yes	90.854	no
[Ref.: #69480]	flagellated	yes	86.033	no
[Ref.: #69480]	gram-positive	no	98.594	no
[Ref.: #69480]	anaerobic	no	97.897	no
[Ref.: #69480]	aerobic	yes	93.672	no
[Ref.: #69480]	halophile	yes	84.877	no
[Ref.: #69480]	spore-forming	no	94.962	no
[Ref.: #69480]	glucose-util	yes	82.592	no
[Ref.: #69480]	thermophile	no	99.304	no
[Ref.: #69480]	glucose-ferment	no	83.285	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 33109, KACC 19883, KCTC 62937

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Marinobacter halodurans sp. nov., a halophilic bacterium isolated from sediment of a salt flat.	Yoo Y, Lee H, Kwon BO, Khim JS, Baek S, Pathiraja D, Park B, Choi IG, Kim GH, Kim BS, Kim JJ	Int J Syst Evol Microbiol	10.1099/ijsem.0.004530	2020	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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Marinobacter halodurans YJ-S3-2

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