Aquirufa antheringensis (LMG 31079, DSM 108553, JCM 32977)

Name: Aquirufa antheringensis (LMG 31079, DSM 108553, JCM 32977)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 164431

Type strain

Strain Designation 30S-ANTBAC

Culture col. no. LMG 31079 DSM 108553 JCM 32977 30S-ANTBAC

NCBI tax ID(s) 2516559

Special Collections DSMZ JCM Literature strains

History JCM <-- M. W. Hahn; Res. Dept. for Limnol., Univ. of Innsbruck, Austria; 30S-ANTBAC. DSMZ <- M. Hahn, Inst. Microbiology, Univ. Innsbruck, Austria; 30S-ANTBAC <- J. Schmidt, Inst. Microbiology, Univ. Innsbruck, Austria; 30S-ANTBAC

Links

Aquirufa antheringensis 30S-ANTBAC is a Gram-negative, motile, rod-shaped bacterium that forms circular colonies and has a orange-red pigmentation.

Gram-negative motile rod-shaped colony-forming pigmented genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 366540

LMG 31079,DSM 108553,JCM 32977

@ref 20215

Last LPSN update 2026-05-29 08:45:24

Domain Bacteria

Phylum Bacteroidota

Class Cytophagia

Order Cytophagales

Family Spirosomataceae

Genus Aquirufa

Species Aquirufa antheringensis

Full scientific name Aquirufa antheringensis Pitt et al. 2019

BacDive ID	Other strains from **Aquirufa antheringensis** (1)	Type strain
175405	A. antheringensis 103A-SOEBACH, DSM 108555, LMG 31082

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Flagellum arrangement	Confidence
68172	negative	1.7 µm	0.6 µm	rod-shaped	gliding
125438	negative					98.995
125438						95

Colony morphology

@ref	Colony color	Colony shape	Medium used
68172	bright red (dark red in older stages)	circular	NSY

Pigmentation

@ref	Production	Color	Name
68172		orange-red	beta, gamma and zeta-carotene
68172			beta-cryptoxanthin, canthaxanthin, phoenicoxanthin and astaxanthin

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
125253	R2A MEDIUM (DSMZ Medium 830)		Medium recipe at MediaDive	Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	20
68172	positive	growth	5-32
125253	positive	growth	25

Physiology and metabolism

Spore formation

@ref	Spore formation	Confidence
125438		93.333

Halophily

@ref	Salt	Growth	Tested relation	Concentration
68172	NaCl	positive	growth	0-0.3 %(w/v)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68172	13705 ChEBI	acetoacetate	+/-	assimilation
68172	78697 ChEBI	D-fructose 6-phosphate	+/-	assimilation
68172	32323 ChEBI	glucuronamide	+/-	assimilation
68172	17309 ChEBI	pectin	+	assimilation
68172	53423 ChEBI	tween 40	+	assimilation

Enzymes

@ref	Value	Activity	Ec
68172	catalase	+	1.11.1.6
68172	cytochrome oxidase	+	1.9.3.1
68172	nitrate reductase	+	1.7.99.4
68172	nitrite reductase	+	1.7.1.4

Fatty acid profile

Metadata FA analysis

@ref

68172

Fatty acid	Percentage	ECL
C15:0 iso 2OH / C16:1 w7c	24.7
C15:0 iso	20.3
C15:0 iso 3OH	13.4
C16:1 w5c	11.9
C15:0 anteiso	5.6
C11:0 iso	3.6
C14:0	2.9
Unknown C14	2.4	14.959
C15:0	2.2
C15:1 w6c	1.5
C12:0 ALDE/Unknown 10.928/iso-C16:1 I/C14:0 3OH/iso-C16:1 I	1.3
C17:1 iso I / C17:1 anteiso B/I I	1.1
C17:0 iso 3OH	1.1
C17:1 w6c	1.1
C16:0 3OH	1
C13:0 iso	0.8
C13:0 anteiso	0.5
C11:0 anteiso	0.5
C17:1 w9c iso	0.4
C15:1 iso h / C13:0 3OH /C15:1 iso I/H /C15:1 iso I	0.3

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude	Enrichment culture
67770	Small creek with medium conductivity and nearly neutral pH located in Anthering			Austria	AUT	Europe
68172	freshwater creek	2017-11-01	Anthering	Austria	AUT	Europe	47.877	13.006 47.877/13.006	NSY
125253	freshwater		Antheringer Bach, Anthering	Austria	AUT	Europe	47.8771	13.0059 47.8771/13.0059

Taxonmaps

69479

Global distribution of 16S sequence MK449343 (>99% sequence identity) for Aquirufa antheringensis subclade from Microbeatlas

Aquatic Samples	8857
Soil Samples	156
Animal Samples	1481
Plant Samples	17
Total Samples	10511

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM430742v1 assembly for Aquirufa antheringensis 30S-ANTBAC	scaffold	GCA_004307425	2516559.3	2816332120	2516559	74.86

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
68172	Aquirufa antheringensis strain 30S-ANTBAC 16S ribosomal RNA gene, partial sequence	MK449343	1368		2516559

GC content

@ref	GC-content (mol%)	Method
68172	42.6	genome sequence analysis

Genome-based predictions

Predictions

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Aquirufa antheringensis 30S-ANTBAC
NCBI: GCA_004307425.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	99.00	yes
125438	anaerobic	anaerobicⓘ	no	96.68	no
125438	aerobic	aerobicⓘ	yes	87.87	no
125438	spore-forming	spore-formingⓘ	no	93.33	no
125438	thermophilic	thermophileⓘ	no	95.54	yes
125438	flagellated	motile2+ⓘ	no	95.00	yes

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Aquirufa antheringensis gen. nov., sp. nov. and Aquirufa nivalisilvae sp. nov., representing a new genus of widespread freshwater bacteria.	Pitt A, Schmidt J, Koll U, Hahn MW	Int J Syst Evol Microbiol	10.1099/ijsem.0.003554	2019

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68172	Alexandra Pitt, Johanna Schmidt, Ulrike Koll and Martin W. Hahn: Aquirufa antheringensis gen. nov., sp. nov. and Aquirufa nivalisilvae sp. nov., representing a new genus of widespread freshwater bacteria. IJSEM 69: 2739 - 2749 2019 ( DOI 10.1099/ijsem.0.003554 )
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125253	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 108553
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Aquirufa antheringensis (LMG 31079, DSM 108553, JCM 32977)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Spore formation

Halophily

Metabolite utilization

Enzymes

Fatty acid profile

Isolation, sampling and environmental information

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_004307425

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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