Streptomyces hygroscopicus subsp. sporocinereus (DSM 41600, NRRL B-1478, RGB A-777)

Name: Streptomyces hygroscopicus subsp. sporocinereus (DSM 41600, NRRL B-1478, RGB A-777)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 16442

Type strain

Strain Designation RGB A-777

Culture col. no. DSM 41600 NRRL B-1478 RGB A-777

NCBI tax ID(s) 588122

Special Collections DSMZ Wink compendium

History <- D. P. Labeda; NRRL B-1478 <- ; RGB A-777

Links

Streptomyces hygroscopicus subsp. sporocinereus RGB A-777 is a prokaryote that builds an aerial mycelium.

genome sequence 16S sequence

Name and taxonomic classification

SI-ID 92646

LMG 19336,ATCC 27477,DSM 40563,IFO 13459,JCM 4850,NRRL B-1476,VKM Ac-583,NRRL B-1478,CBS 760.72,AS 4.1423,NBRC 13459,BCRC 15178,CCRC 15178,ICMP 734,DSM 41600,CGMCC 4.1423

@ref 20215

Last LPSN update 2026-02-09 11:21:58

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Kitasatosporales

Family Streptomycetaceae

Genus Streptomyces

Species Streptomyces hygroscopicus subsp. sporocinereus

Full scientific name Streptomyces hygroscopicus subsp. sporocinereus (Preobrazhenskaya 1986 ex Krassilnikov 1970) Komaki et al. 2022

Synonyms (2)

Streptomyces sporocinereus
Streptomyces demainii

Morphology

Cell morphology

@ref	Gram stain	Confidence	Motility
125439	positive	99.7
125439		93.6

Colony morphology

@ref	Colony color	Medium used
69292	Green brown (8000)	ISP 3
69292	Green brown (8000)	ISP 4
69292	Grey brown (8019)	ISP 5
69292	Olive brown (8008)	ISP 7
69292	Pale brown (8025)	ISP 2
69292	Terra brown (8028)	suter with tyrosine
69292	Terra brown (8028)	suter without tyrosine
69292	Traffic grey A (7042), traffic grey B (7043)	ISP 6

Multicellular morphology

@ref	Complex name	Complex color	Medium name
69292	Aerial mycelium	Stone grey (7030)	ISP 2
69292	Aerial mycelium	Beige grey (7006), mouse grey (7005), black brown (8022)	ISP 3
69292	Aerial mycelium	Pure white (9010), signal black (9004)	ISP 4
69292	Aerial mycelium	Dusty grey (7037)	ISP 5
69292	Aerial mycelium		ISP 6
69292	Aerial mycelium	Stone grey (7030)	ISP 7
69292	Aerial mycelium	Pure white (9010)	suter with tyrosine
69292	Aerial mycelium	Pure white (9010)	suter without tyrosine

Pigmentation

@ref	Production	Color	Name
69292			melanin pigment
69292		Olive brown (8008), khaki grey (7008), sand yellow (1002), ochre yellow (1024), clay brown (8003)	soluble pigment

Multimedia

@ref:	69292
multimedia content:	DSM_41600_image3.jpeg
multimedia.multimedia content:	DSM_41600_image3.jpeg
caption:	Plates (65, ISP2, ISP3, ISP4, ISP5, ISP7)
intellectual property rights:	Helmholtz-Zentrum für Infektionsforschung GmbH
manual_annotation:	1

@ref:	69292
multimedia content:	DSM_41600_image4.jpeg
multimedia.multimedia content:	DSM_41600_image4.jpeg
caption:	Plates (65, ISP2, ISP3, ISP4, ISP5, ISP7)
intellectual property rights:	Helmholtz-Zentrum für Infektionsforschung GmbH
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
10412	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)		Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
10412	ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)		Medium recipe at MediaDive	Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
10412	positive	growth	28

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	97

Spore formation

@ref	Spore formation	Confidence
125439		92.7

Halophily

@ref	Salt	Growth	Tested relation	Concentration
69292	NaCl	positive	growth	0-2.5 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
69292	22599 ChEBI	arabinose	+	growth
69292	62968 ChEBI	cellulose	-	growth
68379	17634 ChEBI	D-glucose	-	fermentation	from API Coryne
68379	16899 ChEBI	D-mannitol	-	fermentation	from API Coryne
68379	16988 ChEBI	D-ribose	-	fermentation	from API Coryne
68379	65327 ChEBI	D-xylose	-	fermentation	from API Coryne
68379	4853 ChEBI	esculin	-	hydrolysis	from API Coryne
69292	28757 ChEBI	fructose	+	growth
68379	5291 ChEBI	gelatin	+	hydrolysis	from API Coryne
69292	17234 ChEBI	glucose	+	growth
68379	28087 ChEBI	glycogen	-	fermentation	from API Coryne
69292	17268 ChEBI	inositol	+/-	growth
68379	17716 ChEBI	lactose	-	fermentation	from API Coryne
68379	17306 ChEBI	maltose	-	fermentation	from API Coryne
69292	37684 ChEBI	mannose	+	growth
68379	17632 ChEBI	nitrate	-	reduction	from API Coryne
69292	16634 ChEBI	raffinose	+	growth
69292	26546 ChEBI	rhamnose	+	growth
69292	17992 ChEBI	sucrose	+	growth
68379	17992 ChEBI	sucrose	-	fermentation	from API Coryne
69292	18222 ChEBI	xylose	+	growth

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68379	alkaline phosphatase	+	3.1.3.1	from API Coryne
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-mannosidase	+	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
68379	beta-galactosidase	-	3.2.1.23	from API Coryne
68382	beta-glucosidase	+	3.2.1.21	from API zym
68379	beta-glucosidase	-	3.2.1.21	from API Coryne
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68379	beta-glucuronidase	-	3.2.1.31	from API Coryne
68382	esterase (C 4)	-		from API zym
68382	esterase lipase (C 8)	-		from API zym
68379	gelatinase	+		from API Coryne
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68379	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API Coryne
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
68379	pyrazinamidase	-	3.5.1.B15	from API Coryne
68379	pyrrolidonyl arylamidase	-	3.4.19.3	from API Coryne
68382	trypsin	+	3.4.21.4	from API zym
68382	valine arylamidase	+		from API zym

API coryne

@ref	Reduction of nitrateNIT	PYZ	PYRA	PAL	beta GUR	beta GAL	alpha GLU	beta NAG	ESC	URE	GEL	Control fermentationControl	GLU	RIB	XYL	MAN	MAL	LAC	SAC	GLYG	CAT
69292	-	-	-	+	-	-	+/-	+	-	+/-	+	not determinedn.d.	-	-	-	-	-	-	-	-	not determinedn.d.

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
69292	not determinedn.d.	+	-	-	-	+	+	+/-	+	+	+	+	+/-	-	-	+/-	+	+	+	-

Isolation, sampling and environmental information

Taxonmaps

69479

Global distribution of 16S sequence HQ244446 (>99% sequence identity) for Streptomyces from Microbeatlas

Aquatic Samples	65
Soil Samples	635
Animal Samples	94
Plant Samples	40
Total Samples	834

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
10412	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
124043	ASM3080374v1 assembly for Streptomyces demainii DSM 41600	contig	GCA_030803745	588122.3	2923609139	588122	75.46

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Streptomyces violaceusniger strain CGMCC 4.1423 16S ribosomal RNA gene, partial sequence	HQ244446	1374	68280
20218	Streptomyces demainii strain DSM 41600 16S ribosomal RNA gene, partial sequence	FJ406126	1398	588122
20218	Streptomyces violaceusniger gene for 16S ribosomal RNA, partial sequence, strain: JCM 4850	D44406	121	68280
20218	Streptomyces demainii strain NRRL B-1478 16S ribosomal RNA gene, partial sequence	DQ334782	1488	588122

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Streptomyces demainii DSM 41600
IMG: 2923609139

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	92.70	no
125439	motility	BacteriaNetⓘ	no	93.60	no
125439	gram_stain	BacteriaNetⓘ	positive	99.70	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	97.00	no

Literature

Title	Authors	Journal	DOI	Year
Taxonomic Positions of a Nyuzenamide-Producer and Its Closely Related Strains.	Komaki H, Igarashi Y, Tamura T	Microorganisms	10.3390/microorganisms10020349	2022
An actinomycete isolate from solitary wasp mud nest having strong antibacterial activity and kills the Candida cells due to the shrinkage and the cytosolic loss.	Kumar V, Naik B, Gusain O, Bisht GS	Front Microbiol	10.3389/fmicb.2014.00446	2014

References

#10412	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 41600
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#68379	Automatically annotated from API Coryne .
#68382	Automatically annotated from API zym .
#69292	Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Streptomyces hygroscopicus subsp. sporocinereus (DSM 41600, NRRL B-1478, RGB A-777)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Multicellular morphology

Pigmentation

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Enzymes

API coryne

API zym

Isolation, sampling and environmental information

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_030803745

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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