Name: Mesobacillus harenae JCM 32794
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 164365

Type strain:

Species: Mesobacillus harenae

Culture col. no.: JCM 32794, CICC 24459

Strain history: B. Zhang; CAS, China; Y40.

Section

Mesobacillus harenae JCM 32794 is a spore-forming, mesophilic, Gram-positive bacterium that was isolated from Sandy doll on the Qinghai-Tibetan Plateau.

Gram-positive
spore-forming
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Mesobacillus*
	Species	**Mesobacillus harenae**
	Full Scientific Name (LPSN)	Mesobacillus harenae Zhang et al. 2021

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #69480]	Motility	yes Confidence in %96.586

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]	Ability of spore formation	yes Confidence in %100
[Ref.: #69481]	Ability of spore formation	yes Confidence in %100

[Ref.: #67770]

Observation

quinones: MK-7

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Sandy doll on the Qinghai-Tibetan Plateau
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Bacillus sp. Y40(2018) strain Y40 16S ribosomal RNA gene, partial sequence	KU601247	1556	ENA	2213203 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Mesobacillus harenae Y40	GCA_013343715	scaffold	GenBank	2213203 tax ID

[Ref.: #67770]

GC-content

40.6 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Mesobacillus harenae Y40 NCBI: GCA_013343715.1
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Mesobacillus harenae Y40 NCBI: GCA_013343715.1
[Ref.: #69480]	motile	yes	85.663	no
[Ref.: #69480]	flagellated	yes	71.443	no
[Ref.: #69480]	gram-positive	yes	90.332	no
[Ref.: #69480]	anaerobic	no	97.967	no
[Ref.: #69480]	aerobic	yes	86.809	no
[Ref.: #69480]	halophile	yes	62.123	no
[Ref.: #69480]	spore-forming	yes	93.178	no
[Ref.: #69480]	glucose-util	yes	84.2	no
[Ref.: #69480]	thermophile	no	97.931	yes
[Ref.: #69480]	glucose-ferment	no	93.275	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 32794, CICC 24459

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Mesobacillus harenae sp. nov., isolated from the sandy soil of a cold desert.	Zhang G, Yang R, Chen T, Zhang B, Yang H, Wu X, Gao H, Zhang W, Liu G	Int J Syst Evol Microbiol	10.1099/ijsem.0.004594	2020	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

* These data were automatically processed and therefore are not curated

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Mesobacillus harenae Y40

Mesobacillus harenae Y40

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