Name: Cryobacterium tepidiphilum JCM 32545
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 164295

Type strain:

Species: Cryobacterium tepidiphilum

Culture col. no.: JCM 32545, CCTCC AA 2018035

Strain history: J. Zhao; Sch. of Life Sci., Northeast Agric. Univ., China; NEAU-85.

NCBI tax ID(s): 2486026 (species)

Section

Cryobacterium tepidiphilum JCM 32545 is a mesophilic bacterium that was isolated from Rhizosphere soil of lettuce in Northeast Agricultural University.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Microbacteriaceae*
	Genus	*Cryobacterium*
	Species	**Cryobacterium tepidiphilum**
	Full Scientific Name (LPSN)	Cryobacterium tepidiphilum Wang et al. 2020

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	25 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-11, MK-10

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Rhizosphere soil of lettuce in Northeast Agricultural University
[Ref.: #67770]	Geographic location (country and/or sea, region)	Heilongjiang Province, northeast China
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Cryobacterium tepidiphilum 16S ribosomal RNA gene, partial sequence	MH102314	1513	ENA	2486026 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Cryobacterium tepidiphilum NEAU-85	GCA_003716325	contig	GenBank	2486026 tax ID

[Ref.: #67770]

GC-content

68.9 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Cryobacterium tepidiphilum NEAU-85 NCBI: GCA_003716325.1
[Ref.: #69480]	motile	yes	61.461	no
[Ref.: #69480]	flagellated	no	94.799	no
[Ref.: #69480]	gram-positive	yes	91.766	no
[Ref.: #69480]	anaerobic	no	99.307	no
[Ref.: #69480]	aerobic	yes	91.925	no
[Ref.: #69480]	halophile	no	84.679	no
[Ref.: #69480]	spore-forming	no	93.253	no
[Ref.: #69480]	glucose-util	yes	81.296	no
[Ref.: #69480]	thermophile	no	97.994	yes
[Ref.: #69480]	glucose-ferment	no	85.853	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 32545, CCTCC AA 2018035

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Cryobacterium tepidiphilum sp. nov., isolated from rhizosphere soil of lettuce (var. ramosa Hort.).	Wang Y, Cao P, Sun P, Zhao J, Sun X, Zhang J, Li C, Xiang W, Wang X	Antonie Van Leeuwenhoek	10.1007/s10482-019-01287-3	2019	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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Cryobacterium tepidiphilum NEAU-85

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