Name: Clostridium fessum JCM 32258
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 164231

Type strain:

Species: Clostridium fessum

Culture col. no.: JCM 32258, KCTC 15633

Strain history: G. Ko; Seoul Natl. Univ., South Korea; SNUG30386.

NCBI tax ID(s): 2126740 (species)

Section

Clostridium fessum JCM 32258 is a mesophilic bacterium that was isolated from Fecal sample of a healthy Korean human.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Eubacteriales*
	Family	*Clostridiaceae*
	Genus	*Clostridium*
	Species	**Clostridium fessum**
	Full Scientific Name (LPSN)	Clostridium fessum Seo et al. 2021

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	37 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Fecal sample of a healthy Korean human
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence KY992934 (>99% sequence identity) for Lachnospiraceae from Microbeatlas

Aquatic Samples	1948
Soil Samples	371
Animal Samples	104857
Plant Samples	69
Total Samples	107245

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Erysipelatoclostridium sp. SNUG30386 16S ribosomal RNA gene, partial sequence	KY992934	1401	ENA	2126740 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Clostridium fessum SNUG30386	GCA_003024715	contig	GenBank	2126740 tax ID

[Ref.: #67770]

GC-content

48.3 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Clostridium fessum SNUG30386 NCBI: GCA_003024715.1
[Ref.: #69480]	flagellated	no	92.504	no
[Ref.: #69480]	gram-positive	yes	85.389	no
[Ref.: #69480]	anaerobic	yes	99.701	no
[Ref.: #69480]	halophile	no	77.821	no
[Ref.: #69480]	spore-forming	no	63.129	no
[Ref.: #69480]	glucose-util	yes	82.99	no
[Ref.: #69480]	aerobic	no	97.99	no
[Ref.: #69480]	thermophile	no	97.738	no
[Ref.: #69480]	motile	no	83.938	no
[Ref.: #69480]	glucose-ferment	yes	66.119	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 32258, KCTC 15633

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Clostridium fessum sp. nov., isolated from human faeces.	Seo B, Jeon K, Baek I, Lee YM, Baek K, Ko G	Int J Syst Evol Microbiol	10.1099/ijsem.0.004579	2020	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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Clostridium fessum SNUG30386

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