Name: Pseudomonas laurentiana JCM 32154
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 164208

Type strain:

Species: Pseudomonas laurentiana

Culture col. no.: JCM 32154, KCTC 62392, NBRC 113027

Strain history: M. H. Wright; Oregon Health & Sci. Univ., USA; GSL-010.

NCBI tax ID(s): 2364649 (species)

Section

Pseudomonas laurentiana JCM 32154 is a mesophilic bacterium that was isolated from Deep waters at a depth of 338 m from the St. Lawrence Estuary.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Pseudomonadales*
	Family	*Pseudomonadaceae*
	Genus	*Pseudomonas*
	Species	**Pseudomonas laurentiana**
	Full Scientific Name (LPSN)	Pseudomonas laurentiana Wright et al. 2019

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Deep waters at a depth of 338 m from the St. Lawrence Estuary
[Ref.: #67770]	Country	Canada
[Ref.: #67770]	Country ISO 3 Code	CAN
[Ref.: #67770]	Continent	North America
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence KY471137 (>99% sequence identity) for Pseudomonas from Microbeatlas

Aquatic Samples	2210
Soil Samples	1775
Animal Samples	2599
Plant Samples	866
Total Samples	7450

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Pseudomonas sp. strain GSL-010 16S ribosomal RNA gene, partial sequence	KY471137	1424	ENA	306 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Pseudomonas laurentiana JCM 32154	GCA_010671685	contig	GenBank	2364649 tax ID
[Ref.: #66792]	Pseudomonas laurentiana JCM 32154	GCA_014648275	scaffold	GenBank	2364649 tax ID	*
[Ref.: #66792]	Pseudomonas laurentiana strain JCM 32154	2364649.3	wgs	PATRIC	2364649 tax ID	*
[Ref.: #66792]	Pseudomonas laurentiana strain JCM 32154	2364649.4	wgs	PATRIC	2364649 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Pseudomonas laurentiana JCM 32154 NCBI: GCA_014648275.1
[Ref.: #69480]	flagellated	yes	87.529	no
[Ref.: #69480]	gram-positive	no	98.445	no
[Ref.: #69480]	anaerobic	no	97.697	no
[Ref.: #69480]	aerobic	yes	93.18	no
[Ref.: #69480]	halophile	no	84.353	no
[Ref.: #69480]	spore-forming	no	96.299	no
[Ref.: #69480]	thermophile	no	99.789	no
[Ref.: #69480]	glucose-util	yes	90.138	no
[Ref.: #69480]	motile	yes	90.375	no
[Ref.: #69480]	glucose-ferment	no	88.523	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 32154, KCTC 62392, NBRC 113027

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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