Bifidobacterium longum subsp. longum JCM 31944 is a bacterium that was isolated from Human feces.
genome sequence Bacteria| @ref 20215 |
Last LPSN update
2026-02-09 11:39:46 |
| Domain Bacteria |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Bifidobacteriales |
| Family Bifidobacteriaceae |
| Genus Bifidobacterium |
| Species Bifidobacterium longum subsp. longum |
| Full scientific name Bifidobacterium longum subsp. longum (Reuter 1963) Mattarelli et al. 2008 (Approved Lists 1980) |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 67770 | ASM82929v1 assembly for Bifidobacterium longum 105-A | complete | GCA_000829295   | 216816.107  | 2648501683  | 216816 | 99.49 |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| An improved temperature-sensitive shuttle vector system for scarless gene deletion in human-gut-associated Bifidobacterium species. | Kozakai T, Nakajima A, Miyazawa K, Sasaki Y, Odamaki T, Katoh T, Fukuma T, Xiao JZ, Suzuki T, Katayama T, Sakanaka M. | iScience | 10.1016/j.isci.2024.111080 | 2024 |  | |
| Development of an improved colonization system for human-derived Bifidobacterium longum subsp. longum in conventional mice through the feeding of raffinose or 1-kestose. | Shimada M, Kawase Y, Sonoyama K, Ogura Y, Hayashi T, Yokota A, Fukiya S. | Biosci Microbiota Food Health | 10.12938/bmfh.2023-055 | 2024 | | |
| Human gut-associated Bifidobacterium species salvage exogenous indole, a uremic toxin precursor, to synthesize indole-3-lactic acid via tryptophan. | Yong CC, Sakurai T, Kaneko H, Horigome A, Mitsuyama E, Nakajima A, Katoh T, Sakanaka M, Abe T, Xiao JZ, Tanaka M, Odamaki T, Katayama T. | Gut Microbes | 10.1080/19490976.2024.2347728 | 2024 | | |
| Methionine utilization by bifidobacteria: possible existence of a reverse transsulfuration pathway. | Wada M, Fukiya S, Suzuki A, Matsumoto N, Matsuo M, Yokota A. | Biosci Microbiota Food Health | 10.12938/bmfh.2020-031 | 2021 | | |
| Application of Recombinase-Based In Vivo Expression Technology to Bifidobacterium longum subsp. longum for Identification of Genes Induced in the Gastrointestinal Tract of Mice. | Koguchi H, Ishigami N, Sakanaka M, Yoshida K, Hiratou S, Shimada M, Fukiya S, Sonoyama K, Yokota A. | Microorganisms | 10.3390/microorganisms8030410 | 2020 | | |
| Diversification of a Fucosyllactose Transporter within the Genus Bifidobacterium. | Ojima MN, Asao Y, Nakajima A, Katoh T, Kitaoka M, Gotoh A, Hirose J, Urashima T, Fukiya S, Yokota A, Abou Hachem M, Sakanaka M, Katayama T. | Appl Environ Microbiol | 10.1128/aem.01437-21 | 2022 | | |
| Metabolism | Evolutionary adaptation in fucosyllactose uptake systems supports bifidobacteria-infant symbiosis. | Sakanaka M, Hansen ME, Gotoh A, Katoh T, Yoshida K, Odamaki T, Yachi H, Sugiyama Y, Kurihara S, Hirose J, Urashima T, Xiao JZ, Kitaoka M, Fukiya S, Yokota A, Lo Leggio L, Abou Hachem M, Katayama T. | Sci Adv | 10.1126/sciadv.aaw7696 | 2019 | |
| Enteric VIP-producing neurons maintain gut microbiota homeostasis through regulating epithelium fucosylation. | Lei C, Sun R, Xu G, Tan Y, Feng W, McClain CJ, Deng Z. | Cell Host Microbe | 10.1016/j.chom.2022.09.001 | 2022 | | |
| Enzymatic Adaptation of Bifidobacterium bifidum to Host Glycans, Viewed from Glycoside Hydrolyases and Carbohydrate-Binding Modules. | Katoh T, Ojima MN, Sakanaka M, Ashida H, Gotoh A, Katayama T. | Microorganisms | 10.3390/microorganisms8040481 | 2020 | | |
| Metabolism | Bifidobacterium species associated with breastfeeding produce aromatic lactic acids in the infant gut. | Laursen MF, Sakanaka M, von Burg N, Morbe U, Andersen D, Moll JM, Pekmez CT, Rivollier A, Michaelsen KF, Molgaard C, Lind MV, Dragsted LO, Katayama T, Frandsen HL, Vinggaard AM, Bahl MI, Brix S, Agace W, Licht TR, Roager HM. | Nat Microbiol | 10.1038/s41564-021-00970-4 | 2021 | |
| Pathogenicity | Next-generation prebiotic promotes selective growth of bifidobacteria, suppressing Clostridioides difficile. | Hirano R, Sakanaka M, Yoshimi K, Sugimoto N, Eguchi S, Yamauchi Y, Nara M, Maeda S, Ami Y, Gotoh A, Katayama T, Iida N, Kato T, Ohno H, Fukiya S, Yokota A, Nishimoto M, Kitaoka M, Nakai H, Kurihara S | Gut Microbes | 10.1080/19490976.2021.1973835 | 2021 | |
| Genetics | A Transposon Mutagenesis System for Bifidobacterium longum subsp. longum Based on an IS3 Family Insertion Sequence, ISBlo11. | Sakanaka M, Nakakawaji S, Nakajima S, Fukiya S, Abe A, Saburi W, Mori H, Yokota A | Appl Environ Microbiol | 10.1128/AEM.00824-18 | 2018 | |
How to citeIf you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive164160.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data
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