Name: Streptomyces jietaisiensis FXJ 46
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 16409

Type strain:

Species: Streptomyces jietaisiensis

Strain Designation: FXJ 46

Culture col. no.: DSM 41866, AS 4.1859, JCM 12279, CGMCC 4.1859, NBRC 102068

Strain history: Y. Huang FXJ46.

NCBI tax ID(s): 235987 (species)

SI-ID 265632

AS 4.1859, JCM 12279, DSM 41866, NBRC 102068, CGMCC 4.1859

Section

Streptomyces jietaisiensis FXJ 46 is an aerobe, spore-forming, mesophilic bacterium that was isolated from cypress forest soil.

Gram-positive
rod-shaped
spore-forming
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces jietaisiensis**
	Full Scientific Name (LPSN)	Streptomyces jietaisiensis He et al. 2005

Information on morphological and physiological properties Morphology

[Ref.: #31392]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #31392]	Cell shape	rod-shaped

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Pigment production

Multimedia content

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Caption:

Medium 65 28°C

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

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Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

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Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

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Culture medium

STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

		Temperature
[Ref.: #10529]	growth	28 °C
[Ref.: #31392]	growth	10-40 °C
[Ref.: #31392]	optimum	25 °C
[Ref.: #67770]	growth	28 °C

[Ref.: #10529]	Temperature range	mesophilic
[Ref.: #31392]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #31392]			optimum	7.5
[Ref.: #31392]			growth	05-10

Information on physiology and metabolism Physiology and metabolism

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Oxygen tolerance

aerobe

[Ref.: #31392]	Ability of spore formation	yes
[Ref.: #69481]	Ability of spore formation	yes Confidence in %100
[Ref.: #69480]	Ability of spore formation	yes Confidence in %100

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #31392]		NaCl		growth	05-07	%
[Ref.: #31392]		NaCl		optimum	6	%

[Ref.: #31392]	Observation	aggregates in chains
[Ref.: #67770]	Observation	quinones: MK-9(H₆), MK-9(H₈), MK-9(H₄)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #31392]	alanine ChEBI	+	carbon source
[Ref.: #31392]	arginine ChEBI	+	carbon source
[Ref.: #31392]	aspartate ChEBI	+	carbon source
[Ref.: #31392]	cellobiose ChEBI	+	carbon source
[Ref.: #31392]	dextrin ChEBI	+	carbon source
[Ref.: #31392]	galactose ChEBI	+	carbon source
[Ref.: #31392]	glucose ChEBI	+	carbon source
[Ref.: #31392]	glutamate ChEBI	+	carbon source
[Ref.: #31392]	glycogen ChEBI	+	carbon source
[Ref.: #31392]	histidine ChEBI	+	carbon source
[Ref.: #31392]	leucine ChEBI	+	carbon source
[Ref.: #31392]	maltose ChEBI	+	carbon source
[Ref.: #31392]	mannitol ChEBI	+	carbon source
[Ref.: #31392]	mannose ChEBI	+	carbon source
[Ref.: #31392]	phenylalanine ChEBI	+	carbon source
[Ref.: #31392]	pyruvate ChEBI	+	carbon source
[Ref.: #31392]	raffinose ChEBI	+	carbon source
[Ref.: #31392]	rhamnose ChEBI	+	carbon source
[Ref.: #31392]	ribitol ChEBI	+	carbon source
[Ref.: #31392]	ribose ChEBI	+	carbon source
[Ref.: #31392]	salicin ChEBI	+	carbon source
[Ref.: #31392]	sorbitol ChEBI	+	carbon source
[Ref.: #31392]	threonine ChEBI	+	carbon source
[Ref.: #31392]	trehalose ChEBI	+	carbon source
[Ref.: #31392]	tween 20 ChEBI	+	carbon source
[Ref.: #31392]	tween 40 ChEBI	+	carbon source
[Ref.: #31392]	tween 80 ChEBI	+	carbon source
[Ref.: #31392]	xylose ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #10529]	Sample type/isolated from	cypress forest soil
[Ref.: #10529]	Geographic location (country and/or sea, region)	Beijing
[Ref.: #10529]	Country	China
[Ref.: #10529]	Country ISO 3 Code	CHN
[Ref.: #10529]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Cypress forest soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	Jietaisi, Beijing
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Forest
#Environmental	#Terrestrial	#Soil
#Host	#Plants	#Tree

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

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Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #10529]	Streptomyces jietaisiensis strain FXJ46 16S ribosomal RNA gene, partial sequence	AY314783	1426	ENA	235987 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Streptomyces jietaisiensis CGMCC 4.1859	GCA_900102095	scaffold	GenBank	235987 tax ID
[Ref.: #66792]	Streptomyces jietaisiensis strain CGMCC 4.1859	235987.5	wgs	PATRIC	235987 tax ID	*
[Ref.: #66792]	Streptomyces jietaisiensis CGMCC 4.1859	2667527442	draft	JGI IMG/M	235987 tax ID	*

[Ref.: #10529]	GC-content	72.3 mol%
[Ref.: #67770]	GC-content	72.3 mol%	thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Streptomyces jietaisiensis CGMCC 4.1859 NCBI: GCA_900102095.1
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces jietaisiensis strain CGMCC 4.1859 PATRIC: 235987.5
[Ref.: #69480]	motile	no	93.868	no
[Ref.: #69480]	gram-positive	yes	90.863	yes
[Ref.: #69480]	anaerobic	no	99.071	yes
[Ref.: #69480]	halophile	no	92.212	yes
[Ref.: #69480]	spore-forming	yes	96.511	yes
[Ref.: #69480]	glucose-util	yes	89.775	yes
[Ref.: #69480]	flagellated	no	98.067	no
[Ref.: #69480]	aerobic	yes	91.217	yes
[Ref.: #69480]	thermophile	no	97.343	no
[Ref.: #69480]	glucose-ferment	no	87.943	no

Availability in culture collections External links

[Ref.: #10529]

Culture collection no.

DSM 41866, AS 4.1859, JCM 12279, CGMCC 4.1859, NBRC 102068

[Ref.: #85456]

SI-ID 265632

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces jietaisiensis sp. nov., isolated from soil in northern China.	He L, Li W, Huang Y, Wang L, Liu Z, Lanoot B, Vancanneyt M, Swings J	Int J Syst Evol Microbiol	10.1099/ijs.0.63460-0	2005	*

References

#10529

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 41866

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#31392

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27703 (see below)

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#85456

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID265632.1 )

#27703

IJSEM 1939 2005 ( DOI 10.1099/ijs.0.63460-0 , PubMed 16166691 )

* These data were automatically processed and therefore are not curated

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Streptomyces jietaisiensis CGMCC 4.1859

Streptomyces jietaisiensis strain CGMCC 4.1859

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