Streptomyces jietaisiensis (DSM 41866, AS 4.1859, JCM 12279)

Name: Streptomyces jietaisiensis (DSM 41866, AS 4.1859, JCM 12279)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 16409

Type strain

Strain Designation FXJ 46

Culture col. no. DSM 41866 AS 4.1859 JCM 12279 FXJ 46 NBRC 102068 1 more

NCBI tax ID(s) 68213

Special Collections DSMZ JCM Literature strains

History <- Z. Liu; AS 4.1859 <- Y. Huang; FXJ 46 Y. Huang FXJ46.

Links

Streptomyces jietaisiensis FXJ 46 is an aerobe, spore-forming, Gram-positive bacterium that was isolated from cypress forest soil.

spore-forming Gram-positive rod-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 265632

AS 4.1859,JCM 12279,DSM 41866,NBRC 102068,CGMCC 4.1859

@ref 20215

Last LPSN update 2026-02-09 11:21:57

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Kitasatosporales

Family Streptomycetaceae

Genus Streptomyces

Species Streptomyces jietaisiensis

Full scientific name Streptomyces jietaisiensis He et al. 2005

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
31392	positive	rod-shaped
125439	positive		99.8
125439			91.4

Pigmentation

31392

Productionno

Multimedia

@ref:	10529
multimedia content:	DSM_41866.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_41866.jpg
caption:	Medium 65 28°C
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
10529	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)	Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
10529	ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)	Medium recipe at MediaDive	Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water
10529	STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252)	Medium recipe at MediaDive	Name: STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) Composition: Agar 14.985 g/l Starch 9.99001 g/l (NH4)2SO4 1.998 g/l CaCO3 1.998 g/l K2HPO4 0.999001 g/l MgSO4 x 7 H2O 0.999001 g/l NaCl 0.999001 g/l FeSO4 x 7 H2O 0.000999001 g/l MnCl2 x 4 H2O 0.000999001 g/l ZnSO4 x 7 H2O 0.000999001 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
10529	positive	growth	28
31392	positive	growth	10-40
31392	positive	optimum	25
67770	positive	growth	28

Culture pH

@ref	Ability	Type	PH	PH range
31392	positive	optimum	7.5
31392	positive	growth	05-10	alkaliphile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
31392	aerobe
125439	obligate aerobe	99.3

Spore formation

@ref	Spore formation	Confidence
31392
125438		91.171
125439		96.3

Halophily

@ref	Salt	Growth	Tested relation	Concentration
31392	NaCl	positive	growth	05-07 %
31392	NaCl	positive	optimum	6 %

Observation

@ref	Observation
31392	aggregates in chains
67770	quinones: MK-9(H₆), MK-9(H₈), MK-9(H₄)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
31392	16449 ChEBI	alanine	+	carbon source
31392	29016 ChEBI	arginine	+	carbon source
31392	35391 ChEBI	aspartate	+	carbon source
31392	17057 ChEBI	cellobiose	+	carbon source
31392	23652 ChEBI	dextrin	+	carbon source
31392	28260 ChEBI	galactose	+	carbon source
31392	17234 ChEBI	glucose	+	carbon source
31392	29987 ChEBI	glutamate	+	carbon source
31392	28087 ChEBI	glycogen	+	carbon source
31392	27570 ChEBI	histidine	+	carbon source
31392	25017 ChEBI	leucine	+	carbon source
31392	17306 ChEBI	maltose	+	carbon source
31392	29864 ChEBI	mannitol	+	carbon source
31392	37684 ChEBI	mannose	+	carbon source
31392	28044 ChEBI	phenylalanine	+	carbon source
31392	15361 ChEBI	pyruvate	+	carbon source
31392	16634 ChEBI	raffinose	+	carbon source
31392	26546 ChEBI	rhamnose	+	carbon source
31392	15963 ChEBI	ribitol	+	carbon source
31392	33942 ChEBI	ribose	+	carbon source
31392	17814 ChEBI	salicin	+	carbon source
31392	30911 ChEBI	sorbitol	+	carbon source
31392	26986 ChEBI	threonine	+	carbon source
31392	27082 ChEBI	trehalose	+	carbon source
31392	53424 ChEBI	tween 20	+	carbon source
31392	53423 ChEBI	tween 40	+	carbon source
31392	53426 ChEBI	tween 80	+	carbon source
31392	18222 ChEBI	xylose	+	carbon source

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Forest
#Environmental	#Terrestrial	#Soil
#Host	#Plants	#Tree

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
10529	cypress forest soil	Beijing	China	CHN	Asia
67770	Cypress forest soil	Jietaisi, Beijing	China	CHN	Asia

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
10529	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	IMG-taxon 2667527442 annotated assembly for Streptomyces griseoaurantiacus CGMCC 4.1859	scaffold	GCA_900102095	235987.5	2667527442	235987	69.62

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
10529	Streptomyces jietaisiensis strain FXJ46 16S ribosomal RNA gene, partial sequence	AY314783	1426		235987

GC content

@ref	GC-content (mol%)	Method
10529	72.3
67770	72.3	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Streptomyces jietaisiensis CGMCC 4.1859
NCBI: GCA_900102095

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	96.30	no
125439	motility	BacteriaNetⓘ	no	91.40	no
125439	gram_stain	BacteriaNetⓘ	positive	99.80	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	99.30	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Streptomyces jietaisiensis strain CGMCC 4.1859
PATRIC: 235987.5

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	88.91	no
125438	anaerobic	anaerobicⓘ	no	96.80	yes
125438	spore-forming	spore-formingⓘ	yes	91.17	yes
125438	aerobic	aerobicⓘ	yes	85.61	no
125438	thermophilic	thermophileⓘ	no	96.00	no
125438	flagellated	motile2+ⓘ	no	89.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces jietaisiensis sp. nov., isolated from soil in northern China.	He L, Li W, Huang Y, Wang L, Liu Z, Lanoot B, Vancanneyt M, Swings J	Int J Syst Evol Microbiol	10.1099/ijs.0.63460-0	2005

References

#10529	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 41866
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#27703	IJSEM 1939 2005 ( DOI 10.1099/ijs.0.63460-0 , PubMed 16166691 )
#31392	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27703
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Streptomyces jietaisiensis (DSM 41866, AS 4.1859, JCM 12279)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_900102095

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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