Name: Streptomyces cheonanensis VC-A46
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 16408

Type strain:

Species: Streptomyces cheonanensis

Strain Designation: VC-A46

Culture col. no.: DSM 41865, KCCM 42119, NBRC 100940, JCM 14549

Strain history: KCCM 42119 <-- B. K. Hwang VC-A46.

NCBI tax ID(s): 312720 (species)

SI-ID 289984

NBRC 100940, DSM 41865, JCM 14549

Section

Streptomyces cheonanensis VC-A46 is an aerobe, spore-forming, mesophilic bacterium that was isolated from radish growing soil.

Gram-positive
rod-shaped
spore-forming
aerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces cheonanensis**
	Full Scientific Name (LPSN)	Streptomyces cheonanensis Kim et al. 2006

Information on morphological and physiological properties Morphology

[Ref.: #31564]	Gram stain	positive

[Ref.: #31564]	Cell shape	rod-shaped

[Ref.: #31564]	Motility	no

[Ref.: #31564]

Pigment production

yes

Multimedia content

[Ref.: #10645]

Caption:

Medium 65 28°C

[Ref.: #10645]

Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

[Ref.: #10645]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #10645]

Culture medium growth

[Ref.: #10645]

Culture medium link

Medium recipe at MediaDive

[Ref.: #10645]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #10645]	growth	28 °C
[Ref.: #31564]	growth	29 °C
[Ref.: #31564]	optimum	29 °C
[Ref.: #67770]	growth	28 °C

[Ref.: #10645]	Temperature range	mesophilic
[Ref.: #31564]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #31564]			optimum	6.5-8
[Ref.: #31564]			growth	6.5-8

Information on physiology and metabolism Physiology and metabolism

[Ref.: #31564]

Oxygen tolerance

aerobe

[Ref.: #31564]

Ability of spore formation

yes

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #31564]		NaCl		growth	0-7	%
[Ref.: #31564]		NaCl		optimum	0-7	%

[Ref.: #31564]

Observation

aggregates in chains

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #31564]	arabinose ChEBI	+	carbon source
[Ref.: #31564]	dextrin ChEBI	+	carbon source
[Ref.: #31564]	esculin ChEBI	+	hydrolysis
[Ref.: #31564]	fructose ChEBI	+	carbon source
[Ref.: #31564]	mannitol ChEBI	+	carbon source
[Ref.: #31564]	melibiose ChEBI	+	carbon source
[Ref.: #31564]	raffinose ChEBI	+	carbon source
[Ref.: #31564]	rhamnose ChEBI	+	carbon source
[Ref.: #31564]	ribitol ChEBI	+	carbon source
[Ref.: #31564]	sucrose ChEBI	+	carbon source
[Ref.: #31564]	xylitol ChEBI	+	carbon source
[Ref.: #31564]	xylose ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #10645]	Sample type/isolated from	radish growing soil
[Ref.: #10645]	Geographic location (country and/or sea, region)	Cheonan
[Ref.: #10645]	Country	Republic of Korea
[Ref.: #10645]	Country ISO 3 Code	KOR
[Ref.: #10645]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Soil of a radish field
[Ref.: #67770]	Geographic location (country and/or sea, region)	Cheonan
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Soil
#Host	#Plants	#Herbaceous plants (Grass,Crops)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AY822606 (>99% sequence identity) for Streptomyces from Microbeatlas

Aquatic Samples	717
Soil Samples	3388
Animal Samples	1265
Plant Samples	1517
Total Samples	6887

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #10645]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #10645]	Streptomyces cheonanensis strain VC-A46 16S ribosomal RNA gene, partial sequence	AY822606	1483	ENA	312720 tax ID

[Ref.: #10645]	GC-content	75.5 mol%
[Ref.: #67770]	GC-content	75.5 mol%	thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #10645]

Culture collection no.

DSM 41865, KCCM 42119, NBRC 100940, JCM 14549

[Ref.: #85455]

SI-ID 289984

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces ginkgonis sp. nov., an endophyte from Ginkgo biloba.	Yan X, Li Y, Wang N, Chen Y, Huang LL	Antonie Van Leeuwenhoek	10.1007/s10482-017-0987-3	2017	*
Phylogeny	Streptomyces harbinensis sp. nov., an endophytic, ikarugamycin-producing actinomycete isolated from soybean root [Glycine max (L.) Merr].	Liu C, Wang X, Zhao J, Liu Q, Wang L, Guan X, He H, Xiang W	Int J Syst Evol Microbiol	10.1099/ijs.0.050088-0	2013	*
Phylogeny	Streptomyces cheonanensis sp. nov., a novel streptomycete with antifungal activity.	Kim HJ, Lee SC, Hwang BK	Int J Syst Evol Microbiol	10.1099/ijs.0.63816-0	2006	*

References

#10645

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 41865

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#31564

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27854 (see below)

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#85455

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID289984.1 )

#27854

IJSEM 471 2006 ( DOI 10.1099/ijs.0.63816-0 , PubMed 16449460 )

* These data were automatically processed and therefore are not curated

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