Acinetobacter lwoffii (DSM 26953, JCM 31073, GC2)

Name: Acinetobacter lwoffii (DSM 26953, JCM 31073, GC2)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 163942

Type strain

Strain Designation GC2

Culture col. no. DSM 26953 JCM 31073 GC2

NCBI tax ID(s) 28090

Special Collections DSMZ JCM Literature strains

History K. Guven; Dicle Univ., Turkey; GC2. <- K. Güven; <- O.Acer, Faculty Sci., Dicle Univ., Diyarbakir, Turkey; GC2

Links

Acinetobacter lwoffii GC2 is an obligate aerobe, mesophilic, Gram-negative prokaryote that forms circular colonies and was isolated from Oil-contaminated soil in Bozku? 1 petroleum station in Diyarbakir in the southeast of Turkey.

Gram-negative coccus-shaped colony-forming obligate aerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 398392

DSM 26953

@ref 20215

Last LPSN update 2025-12-16 10:09:20

Domain Pseudomonadati

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Pseudomonadales

Family Moraxellaceae

Genus Acinetobacter

Species Acinetobacter lwoffii

Full scientific name Acinetobacter lwoffii (Audureau 1940) Brisou and Prévot 1954 (Approved Lists 1980)

Synonyms (2)

"Moraxella lwoffi"
"Acinetobacter mesopotamicus"

BacDive ID	Other strains from **Acinetobacter lwoffii** (51)	Type strain
8058	A. lwoffii DSM 2403, ATCC 15309, CIP 644.10, JCM 6840, ... (type strain)
130854	A. lwoffii 2A, DSM 101862
8059	A. lwoffii ES1-117-3, DSM 30502
8060	A. lwoffii ES1-189-5, DSM 30543
8061	A. lwoffii ES1-189-6, DSM 30544
8062	A. lwoffii ES1-189-7, DSM 30545
8063	A. lwoffii ES1-230-1c, DSM 30554
8064	A. lwoffii ES1-306b, DSM 30571
8065	A. lwoffii ES2-W2a2, DSM 30617
8066	A. lwoffii ES-12, DSM 30754
131596	A. lwoffii Stev48, DSM 103056
23127	A. lwoffii alk 3PO c), DSM 30932
23128	A. lwoffii alk 4PO c), DSM 30935
100220	A. lwoffii STI05065(IMET), Tb2,
134719	A. lwoffii CIP 110447, NIPH 478
134901	A. lwoffii 705-86, CIP 102725
135761	A. lwoffii 2, CIP 55.102
135764	A. lwoffii CIP 55.113
137338	A. lwoffii CIP 70.20, ATCC 17985, NCDC KC 764
137455	A. lwoffii CIP 55.112
137771	A. lwoffii CIP 101718
138338	A. lwoffii 11.976, CIP 54.98
138411	A. lwoffii CIP 100598
138819	A. lwoffii CIP 110448, NIPH 715
139049	A. lwoffii CIP 70.36, ATCC 17987, NCTC 5867
139604	A. lwoffii CIP 102136
139605	A. lwoffii CIP 64.7, ATCC 17910, NCTC 10309
139606	A. lwoffii CIP 70.31, ATCC 9957, CCUG 61662, LMG 985, ...
139612	A. lwoffii CIP 101966
141194	A. lwoffii CCUG 156, ATCC 14291
146826	A. lwoffii CCUG 32185
146914	A. lwoffii CCUG 32443
147799	A. lwoffii CCUG 34253
148628	A. lwoffii CCUG 35742 B
149260	A. lwoffii CCUG 37364
155119	A. lwoffii CCUG 56521
155467	A. lwoffii CCUG 57819
155496	A. lwoffii CCUG 57888
155617	A. lwoffii CCUG 58423
155925	A. lwoffii CCUG 59661
155983	A. lwoffii CCUG 59881
156001	A. lwoffii CCUG 59975
156039	A. lwoffii CCUG 60151
156087	A. lwoffii CCUG 60343
156142	A. lwoffii CCUG 60534
156460	A. lwoffii CCUG 61917
158827	A. lwoffii S2/2 B, DSM 110883
158828	A. lwoffii S 58/4, DSM 110938
173156	A. lwoffii CIP 70.17, ATCC 17925, LMG 1004, NCIMB 9020
173157	A. lwoffii CIP 110967, CIP 200119
173158	A. lwoffii CIP 110969, CIP 200013

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility	Confidence
68311	negative	coccus-shaped
125438	negative			99

Colony morphology

@ref	Colony shape	Incubation period	Medium used
68311	circular	2 days	NB-agar

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
68383	CASO AGAR (MERCK 105458) (DSMZ Medium 220)		Medium recipe at MediaDive	Name: CASO AGAR (MERCK 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water
68383	TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)		Medium recipe at MediaDive	Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
67770	positive	growth	30	mesophilic
68311	positive	growth	10-35
68311	positive	optimum	25-30	mesophilic
68383	positive	growth	28	mesophilic

Culture pH

@ref	Ability	Type	PH	PH range
68311	positive	optimum	6.5-10
68311	positive	growth	6-11	alkaliphile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
68311	obligate aerobe
125438	aerobe	90.814
125439	obligate aerobe	98.6

Spore formation

@ref	Spore formation	Confidence
68311
125438		94.653

Halophily

@ref	Salt	Growth	Tested relation	Concentration
68311	NaCl	positive	growth	0-3 %(w/v)

Observation

@ref	Observation
67770	quinones: Q-8
68311	growth in crude oil and long-chain hydrocarbons

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	+	assimilation	from API 20NE
68369	29016 ChEBI	arginine	-	hydrolysis	from API 20NE
68311	16947 ChEBI	citrate	-	assimilation
68311	15824 ChEBI	D-fructose	-	assimilation
68311	17634 ChEBI	D-glucose	+	carbon source
68311	17634 ChEBI	D-glucose	+	energy source
68369	17634 ChEBI	D-glucose	-	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68369	16899 ChEBI	D-mannitol	-	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	-	assimilation	from API 20NE
68311	65327 ChEBI	D-xylose	+	carbon source
68311	65327 ChEBI	D-xylose	+	energy source
68369	27689 ChEBI	decanoate	+	assimilation	from API 20NE
68369	4853 ChEBI	esculin	-	hydrolysis	from API 20NE
68311	28260 ChEBI	galactose	-	assimilation
68311	5291 ChEBI	gelatin	-	hydrolysis
68369	5291 ChEBI	gelatin	-	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	-	assimilation	from API 20NE
68311	30849 ChEBI	L-arabinose	+	carbon source
68311	30849 ChEBI	L-arabinose	+	energy source
68369	30849 ChEBI	L-arabinose	-	assimilation	from API 20NE
68311	17716 ChEBI	lactose	+	carbon source
68311	17716 ChEBI	lactose	+	energy source
68311	17306 ChEBI	maltose	-	assimilation
68369	17306 ChEBI	maltose	-	assimilation	from API 20NE
68369	59640 ChEBI	N-acetylglucosamine	-	assimilation	from API 20NE
68369	17632 ChEBI	nitrate	-	reduction	from API 20NE
68311	28017 ChEBI	starch	+	assimilation
68311	17992 ChEBI	sucrose	-	assimilation
68311	27082 ChEBI	trehalose	-	assimilation
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68311	18186 ChEBI	tyrosine	-	assimilation
68311	16199 ChEBI	urea	+	assimilation
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68311	35581 ChEBI	indole
68369	35581 ChEBI	indole		from API 20NE

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68369	arginine dihydrolase	-	3.5.3.6	from API 20NE
68369	beta-glucosidase	-	3.2.1.21	from API 20NE
68311	catalase	+	1.11.1.6
68311	cytochrome oxidase	-	1.9.3.1
68369	gelatinase	-		from API 20NE
68369	urease	-	3.5.1.5	from API 20NE

Fatty acid profile

Metadata FA analysis

@ref

68311

Fatty acid	Percentage
C16:0	36.51
C18:1 w9c	32.49
C16:1	20.38
C15:0 iso	3.52
C18:0	2.11
C14:0	1.96
C15:0 anteiso	1.41

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
67770	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	+/-	-	-	not determinedn.d.

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Enrichment culture	Enrichment culture composition	Enrichment culture temperature
67770	Oil-contaminated soil in Bozku? 1 petroleum station in Diyarbakir in the southeast of Turkey
68311	Bozkus 1 petroleum station	Diyarbakir	Turkey	TUR	Asia	BSM	supplemented with 1% crude oil	30
68383	petroleum-contaminated soil	Diyarbakir, Bozku? 1 petroleum station	Turkey	TUR	Asia

Taxonmaps

69479

Global distribution of 16S sequence KJ867435 (>99% sequence identity) for Acinetobacter from Microbeatlas

Aquatic Samples	2946
Soil Samples	822
Animal Samples	6831
Plant Samples	348
Total Samples	10947

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
68383	2	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
68311	ASM1105820v1 assembly for Acinetobacter lwoffii GC2	scaffold	GCA_011058205	1538357.4	2936329364	28090	19.87

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
68311	Acinetobacter lwoffii strain GC2 16S ribosomal RNA gene, partial sequence	KJ867435	1515		28090

GC content

@ref	GC-content (mol%)	Method
68311	42.9	genome sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Acinetobacter lwoffii GC2
NCBI: GCA_011058205

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	88.80	no
125439	motility	BacteriaNetⓘ	no	51.60	no
125439	gram_stain	BacteriaNetⓘ	negative	68.70	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	98.60	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Acinetobacter sp. GC2
PATRIC: 1538357.4

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	99.00	yes
125438	anaerobic	anaerobicⓘ	no	97.30	yes
125438	spore-forming	spore-formingⓘ	no	94.65	yes
125438	aerobic	aerobicⓘ	yes	90.81	no
125438	thermophilic	thermophileⓘ	no	99.48	yes
125438	flagellated	motile2+ⓘ	no	80.17	yes

Literature

Topic	Title	Authors	Journal	DOI	Year
	Counteracting Grey Mould (Botrytis cinerea) in Grapevine 'Glera' Using Three Putative Biological Control Agent Strains (Paraburkholderia sp., Pseudomonas sp., and Acinetobacter sp.): Impact on Symptoms, Yield, and Gene Expression.	Mian G, Belfiore N, Marcuzzo P, Spinelli F, Tomasi D, Colautti A.	Microorganisms	10.3390/microorganisms12081515	2024
Genetics	Genetic Basis of Acinetobacter sp. K1 Adaptation Mechanisms to Extreme Environmental Conditions.	Petrova N, Kiskova J, Kolesarova M, Pristas P.	Life (Basel)	10.3390/life13081728	2023
Phylogeny	Acinetobacter mesopotamicus sp. nov., Petroleum-degrading Bacterium, Isolated from Petroleum-Contaminated Soil in Diyarbakir, in the Southeast of Turkey.	Acer O, Guven K, Poli A, Di Donato P, Leone L, Buono L, Guven RG, Nicolaus B, Finore I	Curr Microbiol	10.1007/s00284-020-02134-9	2020

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68311	Ömer Acer, Kemal Güven, Annarita Poli, Paola Di Donato, Luigi Leone, Lorena Buono, Reyhan Gül Güven, Barbara Nicolaus & Ilaria Finore: Acinetobacter mesopotamicus sp. nov., Petroleum-degrading Bacterium, Isolated from Petroleum-Contaminated Soil in Diyarbakir, in the Southeast of Turkey. Curr Microbiol 77: 3192 - 3200 2020 ( DOI 10.1007/s00284-020-02134-9 )
#68369	Automatically annotated from API 20NE .
#68383	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 26953
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Acinetobacter lwoffii (DSM 26953, JCM 31073, GC2)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

Fatty acid profile?

API 20NE

Isolation, sampling and environmental information

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_011058205

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media

Fatty acid profile