Name: Pedobacter humicola JCM 31010
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 163933

Type strain:

Species: Pedobacter humicola

Culture col. no.: JCM 31010, KACC 18452, KEMB 9005-332

Strain history: J. Kim; Kyonggi Univ., South Korea; R135.

NCBI tax ID(s): 1752078 (species)

Section

Pedobacter humicola JCM 31010 is a mesophilic bacterium that was isolated from Soil in Hwaseong.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Sphingobacteriia*
	Order	*Sphingobacteriales*
	Family	*Sphingobacteriaceae*
	Genus	*Pedobacter*
	Species	**Pedobacter humicola**
	Full Scientific Name (LPSN)	Pedobacter humicola Dahal and Kim 2016

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-7

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Soil in Hwaseong
[Ref.: #67770]	Geographic location (country and/or sea, region)	Gyeonggi-do
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Pedobacter humicola strain R135 16S ribosomal RNA gene, partial sequence	KT032156	1449	ENA	1752078 tax ID

[Ref.: #67770]

GC-content

40.4 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 31010, KACC 18452, KEMB 9005-332

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Pedobacter miscanthi sp. nov., isolated from Miscanthus sinensis.	Chen Z, Tian W, Sun F, Chen Y, Han H, Yao L, Zhang Z	Int J Syst Evol Microbiol	10.1099/ijsem.0.003161	2019	*
Phylogeny	Pedobacter humicola sp. nov., a member of the genus Pedobacter isolated from soil.	Dahal RH, Kim J	Int J Syst Evol Microbiol	10.1099/ijsem.0.001010	2016	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
* These data were automatically processed and therefore are not curated

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