Sphingomonas panacis (KCTC 42347, JCM 30806)

Name: Sphingomonas panacis (KCTC 42347, JCM 30806)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 163879

Type strain

Culture col. no. KCTC 42347 JCM 30806

NCBI tax ID(s) 1560345

Special Collections JCM KCTC

Links

Sphingomonas panacis JCM 30806 is a mesophilic prokaryote that was isolated from Surface of rusty mountain ginseng at Hwacheon Mountain.

mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 24648

KCTC 42347,JCM 30806

@ref 20215

Last LPSN update 2025-12-16 10:09:19

Domain Pseudomonadati

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Sphingomonadales

Family Sphingomonadaceae

Genus Sphingomonas

Species Sphingomonas panacis

Full scientific name Sphingomonas panacis Singh et al. 2017

Synonyms (1)

Parasphingomonas panacis

BacDive ID	Other strains from **Sphingomonas panacis** (1)	Type strain
176992	S. panacis Sp2, 40.16, DSM 117836

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
67770	positive	growth	25	mesophilic

Physiology and metabolism

Observation

67770

Observationquinones: Q-10

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
67770	Surface of rusty mountain ginseng at Hwacheon Mountain	Gangwon Province	Republic of Korea	KOR	Asia

Taxonmaps

69479

Global distribution of 16S sequence KM819014 (>99% sequence identity) for Sphingomonas from Microbeatlas

Aquatic Samples	299
Soil Samples	264
Animal Samples	629
Plant Samples	127
Total Samples	1319

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	IMG accession	NCBI tax ID	Score
124043	ASM171795v1 assembly for Sphingomonas panacis DCY99	complete	GCA_001717955	2751185897	1560345	96.13

Genome browser: GCA_001717955

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Sphingomonas panacis strain DCY99 16S ribosomal RNA gene, partial sequence	KM819014	1408		1560345

GC content

@ref	GC-content (mol%)	Method
67770	64.4	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Sphingomonas panacis sp. nov., isolated from rhizosphere of rusty ginseng.	Singh P, Kim YJ, Hoang VA, Farh Mel-A, Yang DC	Antonie Van Leeuwenhoek	10.1007/s10482-015-0527-y	2015

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Sphingomonas panacis (KCTC 42347, JCM 30806)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Observation

Isolation, sampling and environmental information

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_001717955

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

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