Name: Flavobacterium seoulense JCM 30145
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 163719

Type strain:

Species: Flavobacterium seoulense

Culture col. no.: JCM 30145, KACC 18114

Strain history: H. Yi; Korea Univ., South Korea; EM1321.

NCBI tax ID(s): 1492738 (species)

Section

Flavobacterium seoulense JCM 30145 is a mesophilic bacterium that was isolated from Stream water in Bukhansan National Park.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Flavobacteriaceae*
	Genus	*Flavobacterium*
	Species	**Flavobacterium seoulense**
	Full Scientific Name (LPSN)	Flavobacterium seoulense Shin et al. 2015

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-6

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Stream water in Bukhansan National Park
[Ref.: #67770]	Geographic location (country and/or sea, region)	Seoul
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence KJ461685 (>99% sequence identity) for Flavobacterium seoulense subclade from Microbeatlas

Aquatic Samples	422
Soil Samples	289
Animal Samples	103
Plant Samples	253
Total Samples	1067

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Flavobacterium seoulense strain EM1321 16S ribosomal RNA gene, partial sequence	KJ461685	1362	ENA	1492738 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Flavobacterium seoulense EM1321	GCA_000695795	contig	GenBank	1492738 tax ID

[Ref.: #67770]

GC-content

33.25 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Flavobacterium seoulense EM1321 NCBI: GCA_000695795.1
[Ref.: #69480]	motile	no	89.821	no
[Ref.: #69480]	flagellated	no	94.3	no
[Ref.: #69480]	gram-positive	no	98.081	no
[Ref.: #69480]	anaerobic	no	99.757	no
[Ref.: #69480]	halophile	no	95.688	no
[Ref.: #69480]	spore-forming	no	93.946	no
[Ref.: #69480]	glucose-util	yes	85.855	no
[Ref.: #69480]	aerobic	yes	92.424	no
[Ref.: #69480]	thermophile	no	99.449	yes
[Ref.: #69480]	glucose-ferment	no	89.675	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 30145, KACC 18114

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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Flavobacterium seoulense EM1321

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