Name: Bergeyella cardium JCM 30115
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 163713

Type strain:

Species: Bergeyella cardium

Culture col. no.: JCM 30115, NCCP 15908

Strain history: K. S. Ko 13-07.

NCBI tax ID(s): 1585976 (species)

Section

Bergeyella cardium JCM 30115 is a mesophilic bacterium that was isolated from Blood culture from a patient with infective endocarditis.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Weeksellaceae*
	Genus	*Bergeyella*
	Species	"Bergeyella cardium"
	Full Scientific Name (LPSN)	Bergeyella cardium Sohn et al. 2015

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	37 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Blood culture from a patient with infective endocarditis
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence KJ817166 (>99% sequence identity) for Bergeyella cardium subclade from Microbeatlas

Aquatic Samples	117
Soil Samples	79
Animal Samples	5026
Plant Samples	31
Total Samples	5253

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Bergeyella cardium strain 13-07 16S ribosomal RNA gene, partial sequence	KJ817166	1407	ENA	1585976 tax ID

[Ref.: #67770]

GC-content

33.4 mol%

thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 30115, NCCP 15908

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	A new causative bacteria of infective endocarditis, Bergeyella cardium sp. nov.	Sohn KM, Huh K, Baek JY, Kim YS, Kang CI, Peck KR, Lee NY, Song JH, Ko KS, Chung DR	Diagn Microbiol Infect Dis	10.1016/j.diagmicrobio.2014.12.001	2014	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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