Humibacter ginsengiterrae (KCTC 33520, JCM 30079)

Name: Humibacter ginsengiterrae (KCTC 33520, JCM 30079)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 163704

Type strain

Culture col. no. KCTC 33520 JCM 30079

NCBI tax ID(s) 1132398

Special Collections JCM KCTC

History JCM <-- Y.-J. Kim and D.-C. Yang; Kyung Hee Univ., South Korea; DCY60.

Links

Humibacter ginsengiterrae JCM 30079 is a bacterium that was isolated from Soil of a ginseng field.

16S sequence Bacteria

Name and taxonomic classification

SI-ID 286410

KCTC 33520,JCM 30079

@ref 20215

Last LPSN update 2026-05-29 08:45:13

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Micrococcales

Family Microbacteriaceae

Genus Humibacter

Species Humibacter ginsengiterrae

Full scientific name Humibacter ginsengiterrae Kim et al. 2015

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	28

Physiology and metabolism

Observation

67770

Observationquinones: MK-11, MK-12

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
67770	Soil of a ginseng field	Republic of Korea	KOR	Asia

Taxonmaps

69479

Global distribution of 16S sequence JQ010859 (>99% sequence identity) for Humibacter from Microbeatlas

Aquatic Samples	7
Soil Samples	71
Animal Samples	32
Plant Samples	29
Total Samples	139

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Humibacter ginsengiterrae strain DCY60 16S ribosomal RNA gene, partial sequence	JQ010859	1440		1132398

GC content

@ref	GC-content (mol%)	Method
67770	62.8	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Humibacter ginsengiterrae sp. nov., and Humibacter ginsengisoli sp. nov., isolated from soil of a ginseng field.	Kim EK, Hoang VA, Kim YJ, Nguyen NL, Sukweenadhi J, Kang JP, Yang DC	Int J Syst Evol Microbiol	10.1099/ijs.0.000335	2015

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Content

About us

Humibacter ginsengiterrae (KCTC 33520, JCM 30079)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Observation

Isolation, sampling and environmental information

Isolation

Taxonmaps

Interaction and safety

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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