Name: Pseudomonas matsuisoli JCM 30078
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 163703

Type strain:

Species: Pseudomonas matsuisoli

Culture col. no.: JCM 30078, BCRC 80771, TBRC 7234

Strain history: C.-C. Young; Natl. Chung Hsing Univ., Taiwan; CC-MHH0089.

NCBI tax ID(s): 1515666 (species)

Section

Pseudomonas matsuisoli JCM 30078 is a mesophilic bacterium that was isolated from Soil near the giant statue of Mazu on Matsu Island.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Pseudomonadales*
	Family	*Pseudomonadaceae*
	Genus	*Pseudomonas*
	Species	**Pseudomonas matsuisoli**
	Full Scientific Name (LPSN)	Pseudomonas matsuisoli Lin et al. 2015

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Soil near the giant statue of Mazu on Matsu Island
[Ref.: #67770]	Country	Taiwan
[Ref.: #67770]	Country ISO 3 Code	TWN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Pseudomonas matsuisoli strain CC-MHH0089 16S ribosomal RNA gene, partial sequence	KJ720680	1506	ENA	1515666 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Pseudomonas matsuisoli JCM 30078	GCA_014647635	scaffold	GenBank	1515666 tax ID	*
[Ref.: #66792]	Pseudomonas matsuisoli strain JCM 30078	1515666.3	wgs	PATRIC	1515666 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Pseudomonas matsuisoli JCM 30078 NCBI: GCA_014647635.1
[Ref.: #69480]	flagellated	yes	64.791	no
[Ref.: #69480]	gram-positive	no	98.371	no
[Ref.: #69480]	anaerobic	no	97.275	no
[Ref.: #69480]	aerobic	yes	90.552	no
[Ref.: #69480]	halophile	no	90.37	no
[Ref.: #69480]	spore-forming	no	94.931	no
[Ref.: #69480]	glucose-util	yes	84.944	no
[Ref.: #69480]	thermophile	no	99.67	yes
[Ref.: #69480]	motile	yes	89.156	no
[Ref.: #69480]	glucose-ferment	no	88.926	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 30078, BCRC 80771, TBRC 7234

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Pseudomonas urumqiensis sp. nov., isolated from rhizosphere soil of Alhagi sparsifolia.	Zou Y, He S, Sun Y, Zhang X, Liu Y, Cheng Q	Int J Syst Evol Microbiol	10.1099/ijsem.0.003390	2019	*
Phylogeny	Pseudomonas tarimensis sp. nov., an endophytic bacteria isolated from Populus euphratica.	Anwar N, Rozahon M, Zayadan B, Mamtimin H, Abdurahman M, Kurban M, Abdurusul M, Mamtimin T, Abdukerim M, Rahman E	Int J Syst Evol Microbiol	10.1099/ijsem.0.002295	2017	*
Phylogeny	Pseudomonas matsuisoli sp. nov., isolated from a soil sample.	Lin SY, Hameed A, Hung MH, Liu YC, Hsu YH, Young LS, Young CC	Int J Syst Evol Microbiol	10.1099/ijs.0.000035	2014	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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