Streptomyces albidochromogenes (DSM 41800, AS 4.1863, INA 11792)

Name: Streptomyces albidochromogenes (DSM 41800, AS 4.1863, INA 11792)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 16369

Type strain

Culture col. no. DSM 41800 AS 4.1863 INA 11792 JCM 13858 NBRC 101003 2 more

NCBI tax ID(s) 329524

Special Collections DSMZ JCM

History <- L. Evtushenko, VKM DSM 41800 <-- L. I. Evtushenko VKM Ac-2282.

Links

Streptomyces albidochromogenes DSM 41800 is a bacterium of the family Streptomycetaceae.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 93399

DSM 41800,AS 4.1863,VKM Ac-2282,NBRC 101003,JCM 13858,CGMCC 4.1863

@ref 20215

Last LPSN update 2026-02-09 11:21:57

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Kitasatosporales

Family Streptomycetaceae

Genus Streptomyces

Species Streptomyces albidochromogenes

Full scientific name Streptomyces albidochromogenes Preobrazhenskaya 1986

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	positive	99.8

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
10584	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)	Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
10584	ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)	Medium recipe at MediaDive	Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water
10584	STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252)	Medium recipe at MediaDive	Name: STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) Composition: Agar 14.985 g/l Starch 9.99001 g/l (NH4)2SO4 1.998 g/l CaCO3 1.998 g/l K2HPO4 0.999001 g/l MgSO4 x 7 H2O 0.999001 g/l NaCl 0.999001 g/l FeSO4 x 7 H2O 0.000999001 g/l MnCl2 x 4 H2O 0.000999001 g/l ZnSO4 x 7 H2O 0.000999001 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
10584	positive	growth	28
67770	positive	growth	28

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125438	aerobe	90.296
125439	obligate aerobe	98.9

Spore formation

@ref	Spore formation	Confidence
125438		92.68

Isolation, sampling and environmental information

Taxonmaps

69479

Global distribution of 16S sequence AY999884 (>99% sequence identity) for Streptomyces from Microbeatlas

Aquatic Samples	126
Soil Samples	953
Animal Samples	103
Plant Samples	429
Total Samples	1611

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
10584	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
124043	ASM3952939v1 assembly for Streptomyces albidochromogenes JCM 13858	scaffold	GCA_039529395			329524	57.2
67770	ASM598192v1 assembly for Streptomyces albidochromogenes DSM 41800	contig	GCA_005981925	329524.4	2990020898	329524

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Streptomyces albidochromogenes strain AS 4.1863 16S ribosomal RNA gene, partial sequence	AY999884	1412	329524
20218	Streptomyces albidochromogenes gene for 16S rRNA, partial sequence, strain: NBRC 101003	AB249953	1468	329524
124043	Streptomyces albidochromogenes strain DSM 41800 16S ribosomal RNA gene, partial sequence.	MK583948	1532	329524

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Streptomyces albidochromogenes DSM 41800
NCBI: GCA_005981925

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	84.70	no
125439	motility	BacteriaNetⓘ	no	89.20	no
125439	gram_stain	BacteriaNetⓘ	positive	99.80	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	98.90	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Streptomyces albidochromogenes strain DSM 41800
PATRIC: 329524.4

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	88.63	no
125438	anaerobic	anaerobicⓘ	no	95.86	no
125438	spore-forming	spore-formingⓘ	yes	92.68	no
125438	aerobic	aerobicⓘ	yes	90.30	no
125438	thermophilic	thermophileⓘ	no	94.50	no
125438	flagellated	motile2+ⓘ	no	88.50	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces altiplanensis sp. nov., an alkalitolerant species isolated from Chilean Altiplano soil, and emended description of Streptomyces chryseus (Krasil'nikov et al. 1965) Pridham 1970.	Cortes-Albayay C, Dorador C, Schumann P, Schniete JK, Herron P, Andrews B, Asenjo J, Nouioui I	Int J Syst Evol Microbiol	10.1099/ijsem.0.003525	2019
Phylogeny	Streptomyces hypolithicus sp. nov., isolated from an Antarctic hypolith community.	Le Roes-Hill M, Rohland J, Meyers PR, Cowan DA, Burton SG	Int J Syst Evol Microbiol	10.1099/ijs.0.007971-0	2009

References

#10584	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 41800
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Streptomyces albidochromogenes (DSM 41800, AS 4.1863, INA 11792)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_039529395

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media