Hymenobacter rubidus (KEMB 9004-166, KCTC 32553, JCM 30008)

Name: Hymenobacter rubidus (KEMB 9004-166, KCTC 32553, JCM 30008)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 163685

Type strain

Culture col. no. KEMB 9004-166 KCTC 32553 JCM 30008

NCBI tax ID(s) 1441626

Special Collections JCM KCTC

Links

Hymenobacter rubidus JCM 30008 is a mesophilic prokaryote that was isolated from Soil in South Korea.

mesophilic 16S sequence

Name and taxonomic classification

SI-ID 286379

KCTC 32553,JCM 30008

@ref 20215

Last LPSN update 2025-12-16 10:09:16

Domain Pseudomonadati

Phylum Bacteroidota

Class Cytophagia

Order Cytophagales

Family Hymenobacteraceae

Genus Hymenobacter

Species Hymenobacter rubidus

Full scientific name Hymenobacter rubidus Lee et al. 2016

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
67770	positive	growth	25	mesophilic

Physiology and metabolism

Isolation, sampling and environmental information

Isolation

67770

Sample typeSoil in South Korea

Taxonmaps

69479

Global distribution of 16S sequence KF862489 (>99% sequence identity) for Hymenobacter rubidus from Microbeatlas

Aquatic Samples	3
Soil Samples	115
Animal Samples	7
Plant Samples	8
Total Samples	133

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Hymenobacter rubidus strain DG7B 16S ribosomal RNA gene, partial sequence	KF862489	1458		1441626

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Hymenobacter terrigena sp. nov., isolated from soil.	Ohn JE, Ten LN, Park KI, Kim BO, Han JS, Jung HY	J Microbiol	10.1007/s12275-018-8029-z	2018
Phylogeny	Hymenobacter rubidus sp. nov., bacterium isolated from a soil.	Lee JJ, Joo ES, Kim EB, Jeon SH, Srinivasan S, Jung HY, Kim MK	Antonie Van Leeuwenhoek	10.1007/s10482-016-0652-2	2016

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Hymenobacter rubidus (KEMB 9004-166, KCTC 32553, JCM 30008)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Isolation, sampling and environmental information

Isolation

Taxonmaps

Interaction and safety

Sequence information

16S sequences

Genome-based predictions

Literature

Literature

References

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