Unidentified bacterium (JCM 28301)

Name: Unidentified bacterium (JCM 28301)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 163490

Type strain

Culture col. no. JCM 28301

NCBI tax ID(s) 1869227

Special Collections JCM

History T. Tateishi; Agency for Cultural Affairs, Japan <-- R. Kigawa and J. Sugiyama; Natl. Res. Inst. for Cult. Prop., Tokyo and TechnoSuruga Lab. Co., Ltd., Japan; T7530-16-4b.

Unidentified bacterium JCM 28301 is a mesophilic prokaryote that was isolated from Black viscous gels and pieces of side plaster between west wall 1 and south wall .

mesophilic 16S sequence

Name and taxonomic classification

Culture Collection Numbers

JCM 28301

@ref 67770

Phylum Not assigned to order

Class Not assigned to order

Order Not assigned to order

Family Not assigned to family

Genus Not assigned to family

Species Unidentified bacterium

Full scientific name Unidentified bacterium

Type strain no

BacDive ID	Other strains from Unidentified bacterium (32)	Type strain
161399	U. bacterium JCM 13814, KCCM 42310
161515	U. bacterium JCM 14676
161840	U. bacterium JCM 16616
161841	U. bacterium JCM 16617
161842	U. bacterium JCM 16618
161887	U. bacterium JCM 16863
161892	U. bacterium JCM 16992
162014	U. bacterium JCM 17375
162200	U. bacterium JCM 18222
162201	U. bacterium JCM 18223
162454	U. bacterium JCM 19270
162455	U. bacterium JCM 19271
162456	U. bacterium JCM 19272
162457	U. bacterium JCM 19273
162460	U. bacterium JCM 19276
162464	U. bacterium JCM 19292
162465	U. bacterium JCM 19293
162467	U. bacterium JCM 19295
162474	U. bacterium JCM 19303
163446	U. bacterium JCM 28254
163447	U. bacterium JCM 28255
163463	U. bacterium JCM 28272
163467	U. bacterium JCM 28276
163468	U. bacterium JCM 28277
163469	U. bacterium JCM 28278
163477	U. bacterium JCM 28286
163481	U. bacterium JCM 28292
163985	U. bacterium JCM 31257
164107	U. bacterium JCM 31632
164108	U. bacterium JCM 31633
164109	U. bacterium JCM 31639
164319	U. bacterium JCM 32665, DSM 108248

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
67770	positive	growth	30	mesophilic

Physiology and metabolism

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
67770	Black viscous gels and pieces of side plaster between west wall 1 and south wall (during relocation of the stone chamber)	Takamatsuzuka Tumulus, Asuka Village, Nara Pref.	Japan	JPN	Asia

Taxonmaps

69479

Global distribution of 16S sequence LC133648 (>99% sequence identity) for Olivibacter domesticus from Microbeatlas

Aquatic Samples	16
Soil Samples	49
Animal Samples	29
Plant Samples	71
Total Samples	165

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Sphingobacteriaceae bacterium JCM 28301 gene for 16S ribosomal RNA, partial sequence	LC133648	1482		1818721

Genome-based predictions

Literature

References

#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

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