Name: Acetobacter persici JCM 25330
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 163337

Type strain:

Species: Acetobacter persici

Culture col. no.: JCM 25330, KACC 19724, LMG 26458, NBRC 111468, NRIC 0961

Strain history: TUA 1261B <-- T. Uchimura T-120.

NCBI tax ID(s): 1236503 (strain), 1076596 (species)

SI-ID 381399

LMG 26458, JCM 25330

Special Collections

Other strains from Acetobacter persici

Section

Acetobacter persici JCM 25330 is a Gram-negative bacterium that was isolated from Peach in Tottori,.

Gram-negative
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodospirillales*
	Family	*Acetobacteraceae*
	Genus	*Acetobacter*
	Species	**Acetobacter persici**
	Full Scientific Name (LPSN)	Acetobacter persici corrig. Iino et al. 2013

Synonym

Acetobacter persicus

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %94.833

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Ability of spore formation

no Confidence in %93.261

[Ref.: #67770]

Observation

quinones: Q-9

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Peach (fruit) (Prunus persica) in Tottori,(2007)
[Ref.: #67770]	Host species	Prunus persica
[Ref.: #67770]	Sampling date	2007
[Ref.: #67770]	Country	Japan
[Ref.: #67770]	Country ISO 3 Code	JPN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence AB665070 (>99% sequence identity) for Acetobacter from Microbeatlas

Aquatic Samples	172
Soil Samples	185
Animal Samples	932
Plant Samples	225
Total Samples	1514

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Acetobacter persici gene for 16S rRNA, partial sequence	AB665070	1412	GenBank ENA	1236503 tax ID
[Ref.: #124043]	Acetobacter persici DNA, 16S-23S ribosomal RNA intergenic spacer, partial sequence, strain: JCM 25330.	AB936623	654	GenBank ENA	1236503 tax ID	*
[Ref.: #124043]	Acetobacter persici DNA, 16S-23S ribosomal RNA intergenic spacer, partial sequence, strain: JCM 25330.	AB936624	670	GenBank ENA	1236503 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Acetobacter persici JCM 25330	GCA_000613905	contig	GenBank ENA	1236503 tax ID
[Ref.: #66792]	Acetobacter persici JCM 25330	1236503.3	wgs	PATRIC	1236503 tax ID	*
[Ref.: #66792]	Acetobacter persici JCM 25330	2579778724	draft	JGI IMG/M	1236503 tax ID	*

[Ref.: #67770]

GC-content

58.7 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Acetobacter persici JCM 25330 PATRIC: 1236503.3
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	94.833	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	85.055	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	93.261	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	76.728	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	97.971	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	69.966	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 25330, KACC 19724, LMG 26458, NBRC 111468, NRIC 0961

[Ref.: #114033]

SI-ID 381399

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#114033

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID381399.1 )

#124043

Dr. Isabel Schober, Dr. Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .

* These data were automatically processed and therefore are not curated

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