Name: Halolactibacillus halophilus JCM 21698
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 163239

Type strain:

Species: Halolactibacillus halophilus

Culture col. no.: JCM 21698, IAM 15246, NBRC 100872, NRIC 0632

Strain history: IAM 15246 <-- M. Ishikawa and K. Yamasato M13-1.

NCBI tax ID(s): 306540 (species)

SI-ID 308520

NBRC 100872, JCM 21698, IAM 15246

Special Collections

Other strains from Halolactibacillus halophilus

Section

When using BacDive for research please cite our paper

Halolactibacillus halophilus JCM 21698 is a mesophilic bacterium that was isolated from Living sponge at Oura beach.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Halolactibacillus*
	Species	**Halolactibacillus halophilus**
	Full Scientific Name (LPSN)	Halolactibacillus halophilus Ishikawa et al. 2005

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Living sponge at Oura beach
[Ref.: #67770]	Geographic location (country and/or sea, region)	Miura Peninsula, Kanagawa Pref.
[Ref.: #67770]	Country	Japan
[Ref.: #67770]	Country ISO 3 Code	JPN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #124043]	Halolactibacillus halophilus gene for 16S rRNA, partial sequence, strain: NRIC 0632.	AB362697	1421	GenBank ENA	306540 tax ID	*
[Ref.: #124043]	Halolactibacillus halophilus gene for 16S rRNA, partial sequence, strain: NBRC 100872.	AB681276	1497	GenBank ENA	306540 tax ID	*

[Ref.: #67770]

GC-content

40.5 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 21698, IAM 15246, NBRC 100872, NRIC 0632

[Ref.: #113980]

SI-ID 308520

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#113980

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID308520.1 )

#124043

Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .

* These data were automatically processed and therefore are not curated

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