Rhizobium daejeonense (NBRC 102494, KCTC 12120, IAM 15041)

Name: Rhizobium daejeonense (NBRC 102494, KCTC 12120, IAM 15041)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 163211

Type strain

Culture col. no. NBRC 102494 KCTC 12120 IAM 15041 JCM 21504

NCBI tax ID(s) 240521

Special Collections JCM KCTC

History JCM <-- IAM 15041 <-- Z.-X. Quan L22.

Links

Rhizobium daejeonense JCM 21504 is a bacterium that was isolated from Cyanide degrading bioreactor.

16S sequence Bacteria

Name and taxonomic classification

SI-ID 107105

KCTC 12120,IAM 15041,JCM 21504,NBRC 102494

@ref 20215

Last LPSN update 2026-05-29 08:45:07

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Hyphomicrobiales

Family Rhizobiaceae

Genus Rhizobium

Species Rhizobium daejeonense

Full scientific name Rhizobium daejeonense Quan et al. 2005

Synonyms (2)

Paenirhizobium daejeonense
"Ciceribacter daejeonensis"

BacDive ID	Other strains from **Rhizobium daejeonense** (1)	Type strain
13630	R. daejeonense L61, DSM 17795, JCM 21505, BCRC 80436, CCBAU ... (type strain)

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	28

Physiology and metabolism

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
67770	Cyanide degrading bioreactor	Daejeon	Republic of Korea	KOR	Asia

Taxonmaps

69479

Global distribution of 16S sequence DQ089696 (>99% sequence identity) for Rhizobium from Microbeatlas

Aquatic Samples	59
Soil Samples	69
Animal Samples	18
Plant Samples	180
Total Samples	326

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Rhizobium daejeonense strain L22 16S ribosomal RNA gene, partial sequence	DQ089696	1396		240521
124043	Rhizobium daejeonense gene for 16S rRNA, partial sequence, strain: NBRC 102494.	AB681831	1410		240521

GC content

@ref	GC-content (mol%)	Method
67770	60.9	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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