Name: Pseudoalteromonas distincta JCM 21269
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 163120

Type strain:

Species: Pseudoalteromonas distincta

Culture col. no.: JCM 21269, IAM 14594, NBRC 103035

Strain history: IAM 14594 <-- T. Sawabe H-4 <-- Y. Ezura.

NCBI tax ID(s): 77608 (species)

SI-ID 128927

IAM14594, JCM 21269, NBRC 103035

Special Collections

Other strains from Pseudoalteromonas distincta

Section

Pseudoalteromonas distincta JCM 21269 is a psychrophilic bacterium that was isolated from Wounded frond of Laminaria japonica var. ochotensis.

psychrophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Alteromonadales*
	Family	*Pseudoalteromonadaceae*
	Genus	*Pseudoalteromonas*
	Species	**Pseudoalteromonas distincta**
	Full Scientific Name (LPSN)	Pseudoalteromonas distincta (Romanenko et al. 1995) Ivanova et al. 2000

	Synonym	Pseudoalteromonas elyakovii
	Synonym	Alteromonas elyakovii
	Synonym	Alteromonas distincta
	Synonym	Pseudoalteromonas paragorgicola

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	20 °C

Information on physiology and metabolism Physiology and metabolism

	Enzymes	Enzyme	EC number
[Ref.: #67770]		alginate lyase	4.2.2.3

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Wounded frond of Laminaria japonica var. ochotensis
[Ref.: #67770]	Host species	Laminaria japonica var. ochotensis
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence AB000389 (>99% sequence identity) for Pseudoalteromonas from Microbeatlas

Aquatic Samples	2792
Soil Samples	24
Animal Samples	384
Plant Samples	22
Total Samples	3222

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Pseudoalteromonas elyakovii gene for 16S rRNA	AB000389	1508	GenBank ENA	81037 tax ID
[Ref.: #67770]	Pseudoalteromonas elyakovii gene for 16S rRNA, partial sequence, strain: NBRC 103035	AB681915	1461	GenBank ENA	81037 tax ID

[Ref.: #67770]	GC-content	38.8 mol%	high performance liquid chromatography (HPLC)
[Ref.: #67770]	GC-content	39.8 mol%	thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 21269, IAM 14594, NBRC 103035

[Ref.: #113886]

SI-ID 128927

Literature:

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Cloning, sequence analysis and expression of Pseudoalteromonas elyakovii IAM 14594 gene (alyPEEC) encoding the extracellular alginate lyase.	Sawabe T, Takahashi H, Ezura Y, Gacesa P	Carbohydr Res	10.1016/s0008-6215(01)00198-7	2001	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#113886

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID128927.1 )

* These data were automatically processed and therefore are not curated

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