Streptomyces platensis (DSM 41230, ATCC 23731, CMI 130)

Name: Streptomyces platensis (DSM 41230, ATCC 23731, CMI 130)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 16307

Type strain

Culture col. no. DSM 41230 ATCC 23731 CMI 130 IMRU 3918 IPV 1942 10 more

NCBI tax ID(s) 249582

Special Collections DSMZ JCM

History DSMZ <- R. E. Gordon, IMRU <- B. Camerino, Farmitalia, Fi 2501 <- E. Baldacci JCM <-- KCC S-0325 <-- IPV 1942 <-- E. Baldacci 2501 FI.

Links

Streptomyces platensis DSM 41230 is a bacterium that produces antibiotic compounds and was isolated from soil.

antibiotic compound production genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 38204

ATCC 23731,DSM 41230,JCM 4325,NCIB 10976,NRRL B-3445,IFO 15424,NCIMB 10976,VKM Ac-600,NBRC 15424,LMG 20087,CGMCC 4.1993

@ref 20215

Last LPSN update 2026-05-29 08:28:45

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Kitasatosporales

Family Streptomycetaceae

Genus Streptomyces

Species Streptomyces platensis

Full scientific name Streptomyces platensis Tresner and Backus 1956 (Approved Lists 1980)

Synonyms (3)

"Streptomyces glebosus"
Streptomyces libani subsp. rufus
Streptomyces hygroscopicus subsp. glebosus

BacDive ID	Other strains from **Streptomyces platensis** (3)	Type strain
15310	S. platensis BJ 6, 12096, DSM 40823, ATCC 14607, CGMCC ... (type strain)
15474	S. platensis DSM 40041, ATCC 13865, ATCC 23948, CBS 310.56, ... (type strain)
15473	S. platensis DSM 929, NRRL 8035, UC 5330, JCM 4953, BCRC ...

Morphology

Cell morphology

@ref	Motility	Confidence	Gram stain
125439		92.143
125439		99.107	positive

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
10123	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)		Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
10123	ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)		Medium recipe at MediaDive	Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
10123	positive	growth	28
67770	positive	growth	28

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125438	aerobe	90.821
125439	obligate aerobe	99.251

Spore formation

@ref	Spore formation	Confidence
125438		94.109

Compound production

@ref	Compound
10123	libanomycin
67770	Libanomycin

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
10123	soil	Argentina	ARG	Middle and South America
67770	Soil	Argentina	ARG	Middle and South America

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
10123	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
124043	ASM981161v2 assembly for Streptomyces libani subsp. rufus NBRC 15424	complete	GCA_009811615	249582.3	8110367564	249582	71.6
124043	ASM1464929v1 assembly for Streptomyces libani subsp. rufus JCM 4325	scaffold	GCA_014649295	249582.4	8112189218	249582	46.74

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Streptomyces libani subsp. rufus strain CGMCC 4.1993 16S ribosomal RNA gene, partial sequence	HQ244463	1371	249582
20218	Streptomyces libani subsp. rufus gene for 16S rRNA, partial sequence	AB122760	565	249582
20218	Streptomyces libani subsp. rufus 16S rRNA gene, type strain LMG 20087	AJ781351	1470	249582
20218	Streptomyces libani subsp. rufus gene for 16S rRNA, partial sequence, strain: NBRC 15424	AB184671	1442	249582
124043	Streptomyces libani subsp. rufus strain JCM 4325 16S ribosomal RNA gene, partial sequence.	MT760510	1386	249582

GC content

@ref	GC-content (mol%)	Method
67770	71.1	genome sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM981161v2 assembly for Streptomyces libani subsp. rufus NBRC 15424
NCBI: GCA_009811615

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	gram_stain	BacteriaNetⓘ	positive	99.11	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	99.25	no
125439	motility	BacteriaNetⓘ	no	92.14	no
125439	spore_formation	BacteriaNetⓘ	yes	86.78	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Streptomyces libani subsp. rufus strain JCM 4325
PATRIC: 249582.4

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	88.95	no
125438	anaerobic	anaerobicⓘ	no	96.41	no
125438	spore-forming	spore-formingⓘ	yes	94.11	no
125438	aerobic	aerobicⓘ	yes	90.82	no
125438	thermophilic	thermophileⓘ	no	96.50	yes
125438	flagellated	motile2+ⓘ	no	89.50	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Proteome	Enhancing tandem mass spectrometry-based metabolite annotation with online chemical labeling.	Vitale GA, Xia SN, Duhrkop K, Zare Shahneh MR, Brotz-Oesterhelt H, Mast Y, Brungs C, Bocker S, Schmid R, Wang M, Hughes CC, Petras D.	Nat Commun	10.1038/s41467-025-61240-z	2025
Phylogeny	Description of Streptomyces explomaris sp. nov., isolated from the coastal soil rhizosphere of Juniperus excelsa and reclassification of Streptomyces libani as a later heterotypic synonym of Streptomyces nigrescens.	Shu W, Ruckert-Reed C, Gromyko O, Tistechok S, Kalinowski J, Luzhetskyy A, Wittmann C.	Int J Syst Evol Microbiol	10.1099/ijsem.0.006711	2025
	Genomic and Phenotypic Characterization of Streptomyces sirii sp. nov., Amicetin-Producing Actinobacteria Isolated from Bamboo Rhizospheric Soil.	Zakalyukina YV, Alferova VA, Nikandrova AA, Kiriy AR, Chernyshova AP, Kabilov MR, Baturina OA, Biryukov MV, Sergiev PV, Lukianov DA.	Microorganisms	10.3390/microorganisms12122628	2024

References

#10123	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 41230
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Streptomyces platensis (DSM 41230, ATCC 23731, CMI 130)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Compound production

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_009811615

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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