Name: Sphaerotilus natans JCM 20382
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 162905

Type strain:

Species: Sphaerotilus natans

Culture col. no.: JCM 20382, ATCC 15291, IAM 12068, IFO 13543, NBRC 13543

Strain history: IAM 12068 <-- ATCC 15291 <-- Buckman Labs., Inc..

NCBI tax ID(s): 34103 (species)

Section

Sphaerotilus natans JCM 20382 is a mesophilic bacterium that was isolated from Paper-mill slime.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	07-12-2022 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Betaproteobacteria*
	Order	*Burkholderiales*
	Family	*Comamonadaceae*
	Genus	*Sphaerotilus*
	Species	**Sphaerotilus natans**
	Full Scientific Name (PNU)	Sphaerotilus natans Kützing 1833 (Approved Lists 1980)

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	25 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Paper-mill slime
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence AB680432 (>99% sequence identity) for Sphaerotilus natans subclade from Microbeatlas

Aquatic Samples	16039
Soil Samples	1888
Animal Samples	5244
Plant Samples	1544
Total Samples	24715

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Sphaerotilus natans gene for 16S rRNA, partial sequence, strain: NBRC 13543	AB680432	1450	ENA	34103 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Sphaerotilus natans JCM 20382	GCA_019655895	scaffold	GenBank	34103 tax ID	*
[Ref.: #66792]	Sphaerotilus natans strain JCM 20382	34103.7	wgs	PATRIC	34103 tax ID	*

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 20382, ATCC 15291, IAM 12068, IFO 13543, NBRC 13543

Literature:

	Title	Authors	Journal	DOI	Year
Phylogeny	Morphological and biochemical properties of a Sphaerotilus sp. Isolated from paper mill slimes.	Pellegrin V, Juretschko S, Wagner M, Cottenceau G	Appl Environ Microbiol	10.1128/AEM.65.1.156-162.1999	1999	*
Phylogeny	Phylogeny of the Sphaerotilus-Leptothrix group inferred from morphological comparisons, genomic fingerprinting, and 16S ribosomal DNA sequence analyses.	Siering PL, Ghiorse WC	Int J Syst Bacteriol	10.1099/00207713-46-1-173	1996	*
	Antitumor activity of Sphaerotilus natans and its slime fraction in mice.	Mifuchi I, Masuzawa T, Koike M, Shimizu T, Yanagihara Y	Jpn J Cancer Res		1985	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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