Thermogutta hypogea (VKM B-2782, JCM 19991)

Name: Thermogutta hypogea (VKM B-2782, JCM 19991)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 162684

Type strain

Culture col. no. VKM B-2782 JCM 19991

NCBI tax ID(s) 1331911

Special Collections JCM

History JCM <-- G. Slobodkina SBP2.

Links

Thermogutta hypogea JCM 19991 is a bacterium that was isolated from Deep-subsurface gold mine fracture water in Beatrix mine.

16S sequence Bacteria

Name and taxonomic classification

SI-ID 132708

JCM 19991,VKM B-2782

@ref 20215

Last LPSN update 2026-05-29 08:44:59

Domain Bacteria

Phylum Planctomycetota

Class Planctomycetia

Order Pirellulales

Family Thermoguttaceae

Genus Thermogutta

Species Thermogutta hypogea

Full scientific name Thermogutta hypogea Slobodkina et al. 2015

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	50

Physiology and metabolism

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
67770	Deep-subsurface gold mine fracture water in Beatrix mine	Free State	South Africa	ZAF	Africa

Taxonmaps

69479

Global distribution of 16S sequence KC867695 (>99% sequence identity) for Thermogutta hypogea subclade from Microbeatlas

Aquatic Samples	79
Soil Samples	19
Animal Samples	4
Plant Samples	0
Total Samples	102

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Thermogutta hypogea strain SBP2 16S ribosomal RNA gene, partial sequence	KC867695	1445		1331911

GC content

@ref	GC-content (mol%)	Method
67770	66.6	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	South Africa's indigenous microbial diversity for industrial applications: A review of the current status and opportunities.	Chhiba V, Pillay P, Mtimka S, Moonsamy G, Kwezi L, Pooe OJ, Tsekoa TL.	Heliyon	10.1016/j.heliyon.2023.e16723	2023
Genetics	Hydrogen-Fueled Microbial Pathways in Biogas Upgrading Systems Revealed by Genome-Centric Metagenomics.	Treu L, Campanaro S, Kougias PG, Sartori C, Bassani I, Angelidaki I.	Front Microbiol	10.3389/fmicb.2018.01079	2018
Phylogeny	Thermogutta terrifontis gen. nov., sp. nov. and Thermogutta hypogea sp. nov., thermophilic anaerobic representatives of the phylum Planctomycetes.	Slobodkina GB, Kovaleva OL, Miroshnichenko ML, Slobodkin AI, Kolganova TV, Novikov AA, van Heerden E, Bonch-Osmolovskaya EA	Int J Syst Evol Microbiol	10.1099/ijs.0.000009	2014

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Content

About us

Thermogutta hypogea (VKM B-2782, JCM 19991)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Isolation, sampling and environmental information

Isolation

Taxonmaps

Interaction and safety

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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