Name: Prauserella shujinwangii JCM 19736
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 162596

Type strain:

Species: Prauserella shujinwangii

Culture col. no.: JCM 19736, CGMCC 4.7125

Strain history: L. Zhang XJ46.

NCBI tax ID(s): 1453103 (species)

Special Collections

Section

Prauserella shujinwangii JCM 19736 is an aerobe, spore-forming, mesophilic bacterium that was isolated from Desert soil.

spore-forming
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Pseudonocardiales*
	Family	*Pseudonocardiaceae*
	Genus	*Prauserella*
	Species	**Prauserella shujinwangii**
	Full Scientific Name (LPSN)	Prauserella shujinwangii Liu et al. 2014

Synonym

"Qaidamihabitans shujinwangii"

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Oxygen tolerance

aerobe Confidence in %90.096

[Ref.: #69481]

Ability of spore formation

yes Confidence in %97

[Ref.: #67770]

Observation

quinones: MK-9(H₄), MK-8(H₄)

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Desert soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	Xinjiang Uyghur Autonomous Region
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence KJ125073 (>99% sequence identity) for Prauserella shujinwangii subclade from Microbeatlas

Aquatic Samples	4
Soil Samples	30
Animal Samples	12
Plant Samples	7
Total Samples	53

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Prauserella shujinwangii strain XJ46 16S ribosomal RNA gene, partial sequence	KJ125073	1493	GenBank ENA	1453103 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Prauserella shujinwangii CGMCC 4.7125	GCA_003001955	contig	GenBank ENA	1453103 tax ID
[Ref.: #66792]	Prauserella shujinwangii strain CGMCC 4.7125	1453103.3	wgs	PATRIC	1453103 tax ID	*
[Ref.: #66792]	Prauserella shujinwangii CGMCC 4.7125	2718217639	draft	JGI IMG/M	1453103 tax ID	*

[Ref.: #67770]

GC-content

67.5 mol%

thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Prauserella shujinwangii strain CGMCC 4.7125 PATRIC: 1453103.3
[Ref.: #69481]	spore-forming	spore-formingⓘ	yes	97	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Prauserella shujinwangii strain CGMCC 4.7125 PATRIC: 1453103.3
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	89.822	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	95.91	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	81.394	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	90.096	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	92.885	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	89.5	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 19736, CGMCC 4.7125

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Prauserella shujinwangii sp. nov., from a desert environment.	Liu M, Zhang L, Ren B, Yang N, Yu X, Wang J, Ding L, Liu X, Liu Z, Goodfellow M, Zhang L	Int J Syst Evol Microbiol	10.1099/ijs.0.065425-0	2014	*
Phylogeny	Qaidamihabitans albus gen. nov., sp. nov., a new member of the family Pseudonocardiaceae, and transfer of Prauserella shujinwangii to Qaidamihabitans gen. nov. as Qaidamihabitans shujinwangii comb. nov.	Tian LS, Jiang GQ, Li R, Ni P, Li CE, Zhang HY, Wang J, Zhang XP, Wang Y, Tang SK	Arch Microbiol	10.1007/s00203-021-02512-2	2021	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

* These data were automatically processed and therefore are not curated

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Prauserella shujinwangii strain CGMCC 4.7125

Prauserella shujinwangii strain CGMCC 4.7125

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