Name: Halobellus rufus JCM 19434
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 162496

Type strain:

Species: Halobellus rufus

Culture col. no.: JCM 19434, CECT 8423

Strain history: S. W. Roh; Korea Basic Sci. Inst., South Korea; CBA1103.

NCBI tax ID(s): 1448860 (species)

SI-ID 394340

CECT 8423, JCM 19434

Section

Halobellus rufus JCM 19434 is a mesophilic archaeon that was isolated from Non-purified solar salt.

mesophilic
16S sequence
Archaea
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Archaea"
	Phylum	*Methanobacteriota*
	Class	*Halobacteria*
	Order	*Haloferacales*
	Family	*Haloferacaceae*
	Genus	*Halobellus*
	Species	**Halobellus rufus**
	Full Scientific Name (LPSN)	Halobellus rufus Cha et al. 2014

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	37 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Non-purified solar salt
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence KF314040 (>99% sequence identity) for Halobellus rufus subclade from Microbeatlas

Aquatic Samples	13
Soil Samples	5
Animal Samples
Plant Samples
Total Samples	18

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Halobellus rufus strain CBA1103 16S ribosomal RNA gene, partial sequence	KF314040	1473	ENA	1448860 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Halobellus rufus CBA1103	GCA_000739575	contig	GenBank	1448860 tax ID

[Ref.: #67770]

GC-content

67 mol%

thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Halobellus rufus CBA1103 NCBI: GCA_000739575.1
[Ref.: #69480]	motile	no	55.712	no
[Ref.: #69480]	flagellated	no	94.124	no
[Ref.: #69480]	gram-positive	no	96.443	no
[Ref.: #69480]	anaerobic	no	95.334	no
[Ref.: #69480]	aerobic	yes	82.62	no
[Ref.: #69480]	halophile	yes	88.461	no
[Ref.: #69480]	spore-forming	no	94.145	no
[Ref.: #69480]	thermophile	no	67.263	yes
[Ref.: #69480]	glucose-util	yes	90.672	no
[Ref.: #69480]	glucose-ferment	no	83.645	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 19434, CECT 8423

[Ref.: #113498]

SI-ID 394340

Literature:

Topic	Title	Authors	Journal	DOI	Year
Genetics	Draft genome sequence of the agarolytic haloarchaeon Halobellus rufus type strain CBA1103.	Lee MH, Rhee JK, Cha IT, Song EJ, Song HS, Yim KJ, Seo MJ, Choi JS, Choi HJ, Yoon C, Nam YD, Roh SW	FEMS Microbiol Lett	10.1093/femsle/fnu005	2014	*
Phylogeny	Halobellus rufus sp. nov., an extremely halophilic archaeon isolated from non-purified solar salt.	Cha IT, Yim KJ, Song HS, Lee HW, Hyun DW, Kim KN, Seo MJ, Kim D, Choi JS, Lee SJ, Bae JW, Rhee SK, Choi HJ, Rhee JK, Nam YD, Roh SW	Antonie Van Leeuwenhoek	10.1007/s10482-014-0147-y	2014	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#113498

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID394340.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Halobellus rufus in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF

Halobellus rufus CBA1103

Change proposal

Change proposal