Nonlabens ulvanivorans (JCM 19297)

Name: Nonlabens ulvanivorans (JCM 19297)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 162469

Type strain

Culture col. no. JCM 19297

NCBI tax ID(s) 906888

Special Collections JCM

History T. Sawabe NR32.

Links

Nonlabens ulvanivorans JCM 19297 is a bacterium that was isolated from Rock surface on the coat near Nanaehama.

genome sequence Bacteria

Name and taxonomic classification

SI-ID 391030

JCM 19297

@ref 20215

Last LPSN update 2026-02-09 11:39:24

Domain Bacteria

Phylum Bacteroidota

Class Flavobacteriia

Order Flavobacteriales

Family Flavobacteriaceae

Genus Nonlabens

Species Nonlabens ulvanivorans

Full scientific name Nonlabens ulvanivorans (Barbeyron et al. 2011) Yi and Chun 2012

Synonyms (1)

Persicivirga ulvanivorans

BacDive ID	Other strains from **Nonlabens ulvanivorans** (5)	Type strain
5725	N. ulvanivorans PLR, DSM 22727, CIP 110082 (type strain)
162459	N. ulvanivorans JCM 19275
162468	N. ulvanivorans JCM 19296
162470	N. ulvanivorans JCM 19298
162479	N. ulvanivorans JCM 19314

Morphology

Cell morphology

@ref	Confidence	Gram stain
125438	91.5
125438	98.585	negative
125439	99.2	negative

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	30

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	96.9

Spore formation

@ref	Spore formation	Confidence
125438		90.275
125439		96.9

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
67770	Rock surface on the coat near Nanaehama	Hakodate	Japan	JPN	Asia

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM75526v1 assembly for Nonlabens ulvanivorans JCM 19297	contig	GCA_000755265	906888.7	2630968667	906888	23.49

GC content

@ref	GC-content (mol%)	Method
67770	35.1	genome sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Nonlabens ulvanivorans JCM 19297
NCBI: GCA_000755265

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	96.90	no
125439	motility	BacteriaNetⓘ	no	68.60	no
125439	gram_stain	BacteriaNetⓘ	negative	99.20	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	96.90	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Nonlabens ulvanivorans strain JCM19297
PATRIC: 906888.7

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	98.59	no
125438	anaerobic	anaerobicⓘ	no	96.69	no
125438	aerobic	aerobicⓘ	yes	88.45	no
125438	spore-forming	spore-formingⓘ	no	90.28	no
125438	thermophilic	thermophileⓘ	no	96.12	yes
125438	flagellated	motile2+ⓘ	no	91.50	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Draft Genome Sequences of Marine Flavobacterium Nonlabens Strains NR17, NR24, NR27, NR32, NR33, and Ara13.	Nakanishi M, Meirelles P, Suzuki R, Takatani N, Mino S, Suda W, Oshima K, Hattori M, Ohkuma M, Hosokawa M, Miyashita K, Thompson FL, Niwa A, Sawabe T, Sawabe T.	Genome Announc	10.1128/genomea.01165-14	2014
Metabolism	Prokaryotic viperins produce diverse antiviral molecules.	Bernheim A, Millman A, Ofir G, Meitav G, Avraham C, Avraham C, Shomar H, Rosenberg MM, Tal N, Melamed S, Amitai G, Sorek R.	Nature	10.1038/s41586-020-2762-2	2021

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Nonlabens ulvanivorans (JCM 19297)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_000755265

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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