Sphingobacterium pakistanense (NCCP 246, LMG 28524, KCTC 23914)

Name: Sphingobacterium pakistanense (NCCP 246, LMG 28524, KCTC 23914)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 162360

Type strain

Culture col. no. NCCP 246 LMG 28524 KCTC 23914 JCM 18974

NCBI tax ID(s) 977983

Special Collections JCM KCTC

History JCM <-- I. Ahmed NCCP-246.

Links

Sphingobacterium pakistanense JCM 18974 is a bacterium that was isolated from Vigna mungo roots and rhizospheric soil sample collected from Research Farm area of Pir Mehr Ali Shah Arid Agriculture University.

16S sequence Bacteria

Name and taxonomic classification

SI-ID 287997

KCTC 23914,JCM 18974

@ref 20215

Last LPSN update 2026-05-29 08:44:54

Domain Bacteria

Phylum Bacteroidota

Class Sphingobacteriia

Order Sphingobacteriales

Family Sphingobacteriaceae

Genus Sphingobacterium

Species Sphingobacterium pakistanense

Full scientific name Sphingobacterium pakistanense Ahmed et al. 2015

Synonyms (1)

"Sphingobacterium pakistanensis"

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	30

Physiology and metabolism

Observation

67770

Observationquinones: MK-7

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent
67770	Vigna mungo roots and rhizospheric soil sample collected from Research Farm area of Pir Mehr Ali Shah Arid Agriculture University	Vigna mungo	Rawalpindi	Pakistan	PAK	Asia

Taxonmaps

69479

Global distribution of 16S sequence AB610802 (>99% sequence identity) for Sphingobacterium pakistanense subclade from Microbeatlas

Aquatic Samples	51
Soil Samples	199
Animal Samples	124
Plant Samples	67
Total Samples	441

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Sphingobacterium pakistanense gene for 16S rRNA, partial sequence	AB610802	1460		977983

GC content

@ref	GC-content (mol%)	Method
67770	39.2	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Pathogenicity	Targeted Depletion of Bacteria from Mixed Populations by Programmable Adhesion with Antagonistic Competitor Cells.	Ting SY, Martinez-Garcia E, Huang S, Bertolli SK, Kelly KA, Cutler KJ, Su ED, Zhi H, Tang Q, Radey MC, Raffatellu M, Peterson SB, de Lorenzo V, Mougous JD.	Cell Host Microbe	10.1016/j.chom.2020.05.006	2020
	Modulation of drought adversities in Vicia faba by the application of plant growth promoting rhizobacteria and biochar.	Nafees M, Ullah S, Ahmed I	Microsc Res Tech	10.1002/jemt.24047	2022
Stress	Morphological and elemental evaluation of biochar through analytical techniques and its combined effect along with plant growth promoting rhizobacteria on Vicia faba L. under induced drought stress.	Nafees M, Ullah S, Ahmed I	Microsc Res Tech	10.1002/jemt.23854	2021
Phylogeny	Sphingobacterium pakistanensis sp. nov., a novel plant growth promoting rhizobacteria isolated from rhizosphere of Vigna mungo.	Ahmed I, Ehsan M, Sin Y, Paek J, Khalid N, Hayat R, Chang YH	Antonie Van Leeuwenhoek	10.1007/s10482-013-0077-0	2013

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Sphingobacterium pakistanense (NCCP 246, LMG 28524, KCTC 23914)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Observation

Isolation, sampling and environmental information

Isolation

Taxonmaps

Interaction and safety

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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