Name: Paenibacillus alba JCM 18165
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 162188

Type strain:

Species: Paenibacillus alba

Culture col. no.: JCM 18165, KEMC 7302-005, LMG 31323

Strain history: S.-S. Lee J20-6.

NCBI tax ID(s): 1197127 (species)

Section

Paenibacillus alba JCM 18165 is a mesophilic bacterium that was isolated from Peat soil.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Paenibacillaceae*
	Genus	*Paenibacillus*
	Species	"Paenibacillus alba"
	Full Scientific Name (LPSN)	Paenibacillus alba Kim et al. 2015

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-7

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Peat soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	Prokopyevsk, Kemerovo Oblast
[Ref.: #67770]	Country	Russia
[Ref.: #67770]	Country ISO 3 Code	RUS
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Paenibacillus sp. J20-6 16S ribosomal RNA gene, partial sequence	JQ966212	1478	ENA	1197127 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Paenibacillus alba LMG 31323	GCA_013204855	scaffold	GenBank	1197127 tax ID
[Ref.: #66792]	Paenibacillus alba strain LMG 31323	1197127.3	wgs	PATRIC	1197127 tax ID	*

[Ref.: #67770]

GC-content

49.9 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Paenibacillus alba strain LMG 31323 PATRIC: 1197127.3
[Ref.: #69480]	motile	yes	85.818	no
[Ref.: #69480]	gram-positive	yes	79.816	no
[Ref.: #69480]	anaerobic	no	99.093	no
[Ref.: #69480]	aerobic	yes	86.532	no
[Ref.: #69480]	halophile	no	95.264	no
[Ref.: #69480]	spore-forming	yes	93.126	no
[Ref.: #69480]	glucose-util	yes	89.543	no
[Ref.: #69480]	flagellated	yes	83.295	no
[Ref.: #69480]	thermophile	no	99.896	no
[Ref.: #69480]	glucose-ferment	no	89.937	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 18165, KEMC 7302-005, LMG 31323

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Paenibacillus alba nov., isolated from peat soil.	Kim HS, Srinivasan S, Lee SS	Curr Microbiol	10.1007/s00284-015-0795-9	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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Paenibacillus alba strain LMG 31323

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