Noviherbaspirillum autotrophicum (JCM 17720)

Name: Noviherbaspirillum autotrophicum (JCM 17720)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 162089

Type strain

Culture col. no. JCM 17720

NCBI tax ID(s) 709839

Special Collections JCM

Links

Noviherbaspirillum autotrophicum JCM 17720 is a mesophilic prokaryote that was isolated from Rice paddy soil under N₂O-reducing conditions.

mesophilic 16S sequence

Name and taxonomic classification

SI-ID 133362

JCM 17720

@ref 20215

Last LPSN update 2025-12-16 10:08:54

Domain Pseudomonadati

Phylum Pseudomonadota

Class Betaproteobacteria

Order Burkholderiales

Family Oxalobacteraceae

Genus Noviherbaspirillum

Species Noviherbaspirillum autotrophicum

Full scientific name Noviherbaspirillum autotrophicum Ishii et al. 2017

BacDive ID	Other strains from **Noviherbaspirillum autotrophicum** (1)	Type strain
140483	N. autotrophicum JCM 17723, DSM 25787, TSA 66 (type strain)

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
67770	positive	growth	30	mesophilic

Physiology and metabolism

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
67770	Rice paddy soil under N₂O-reducing conditions	Tokyo	Japan	JPN	Asia

Taxonmaps

69479

Global distribution of 16S sequence AB545624 (>99% sequence identity) for Noviherbaspirillum from Microbeatlas

Aquatic Samples	4
Soil Samples	45
Animal Samples	7
Plant Samples	14
Total Samples	70

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Herbaspirillum sp. TSO23-1 gene for 16S ribosomal RNA, partial sequence	AB545624	1453		709839

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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