Name: Noviherbaspirillum autotrophicum JCM 17720
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 162089

Type strain:

Species: Noviherbaspirillum autotrophicum

Culture col. no.: JCM 17720

Strain history: S. Ishii TSO23-1.

NCBI tax ID(s): 709839 (species)

Other strains from Noviherbaspirillum autotrophicum

N. autotrophicum JCM 17723, DSM 25787, TSA 66 (type strain)

Section

Noviherbaspirillum autotrophicum JCM 17720 is a mesophilic bacterium that was isolated from Rice paddy soil under N₂O-reducing conditions.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Betaproteobacteria*
	Order	*Burkholderiales*
	Family	*Oxalobacteraceae*
	Genus	*Noviherbaspirillum*
	Species	**Noviherbaspirillum autotrophicum**
	Full Scientific Name (LPSN)	Noviherbaspirillum autotrophicum Ishii et al. 2017

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Rice paddy soil under N₂O-reducing conditions
[Ref.: #67770]	Geographic location (country and/or sea, region)	Tokyo
[Ref.: #67770]	Country	Japan
[Ref.: #67770]	Country ISO 3 Code	JPN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence AB545624 (>99% sequence identity) for Noviherbaspirillum from Microbeatlas

Aquatic Samples	4
Soil Samples	45
Animal Samples	7
Plant Samples	14
Total Samples	70

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Herbaspirillum sp. TSO23-1 gene for 16S ribosomal RNA, partial sequence	AB545624	1453	ENA	709839 tax ID

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 17720

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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