Cite this strain

Sphingobium sp. (JCM 17233)

Name: Sphingobium sp. (JCM 17233)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 161989

Type strain

Culture col. no. JCM 17233

NCBI tax ID(s) 1912891

Special Collections JCM

History JCM <-- Y. Nagata MI1205.

Links

JCM 17233 is a bacterium that was isolated from HCH-contaminated soil.

16S sequence Bacteria

Name and taxonomic classification

SI-ID 393554

JCM 17233

@ref 20215

Last LPSN update 2026-05-29 08:44:49

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Sphingomonadales

Family Sphingomonadaceae

Genus Sphingobium

Full scientific name Sphingobium Takeuchi et al. 2001

Synonyms (3)

Parasphingobium
Alterisphingobium
Yabuuchia

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	30

Physiology and metabolism

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
67770	HCH-contaminated soil	Miyagi Pref.	Japan	JPN	Asia

Taxonmaps

69479

Global distribution of 16S sequence AB277549 (>99% sequence identity) for Sphingobium herbicidovorans from Microbeatlas

Aquatic Samples	58
Soil Samples	109
Animal Samples	107
Plant Samples	23
Total Samples	297

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Sphingobium sp. MI1205 gene for 16S ribosomal RNA, partial sequence	AB277549	1196		407020

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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