Zobellella aerophila (KACC 15081, JCM 17110)

Name: Zobellella aerophila (KACC 15081, JCM 17110)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 161937

Type strain

Culture col. no. KACC 15081 JCM 17110

NCBI tax ID(s) 870480

Special Collections JCM

History JCM <-- J. Chun JC2671.

Links

Zobellella aerophila JCM 17110 is a bacterium that was isolated from Seashore sand.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 132655

JCM 17110

@ref 20215

Last LPSN update 2026-05-29 08:44:48

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Aeromonadales

Family Aeromonadaceae

Genus Zobellella

Species Zobellella aerophila

Full scientific name Zobellella aerophila Yi et al. 2011

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	negative	99.368

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	30

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate anaerobe	94.104

Spore formation

@ref	Spore formation	Confidence
125439		99.975

Isolation, sampling and environmental information

Isolation

67770

Sample typeSeashore sand

Taxonmaps

69479

Global distribution of 16S sequence HM475140 (>99% sequence identity) for Zobellella aerophila subclade from Microbeatlas

Aquatic Samples	13
Soil Samples	0
Animal Samples	2
Plant Samples	0
Total Samples	15

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM3953932v1 assembly for Zobellella aerophila JCM 17110	scaffold	GCA_039539325	870480	72.75

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Zobellella aerophila strain JC2671 from South Korea 16S ribosomal RNA gene, partial sequence	HM475140	1464		870480

GC content

@ref	GC-content (mol%)	Method
67770	59	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM3953932v1 assembly for Zobellella aerophila JCM 17110
NCBI: GCA_039539325

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate anaerobe	94.10	no
125439	gram_stain	BacteriaNetⓘ	negative	99.37	no
125439	motility	BacteriaNetⓘ	yes	81.89	no
125439	spore_formation	BacteriaNetⓘ	no	99.98	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Zobellella aerophila sp. nov., isolated from seashore sand, and emended description of the genus Zobellella.	Yi H, Song J, Cho JC, Chun J	Int J Syst Evol Microbiol	10.1099/ijs.0.027466-0	2010

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Zobellella aerophila (KACC 15081, JCM 17110)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_039539325

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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