Halomonas cibimaris (KACC 14932, JCM 16914)

Name: Halomonas cibimaris (KACC 14932, JCM 16914)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 161890

Type strain

Culture col. no. KACC 14932 JCM 16914

NCBI tax ID(s) 657012

Special Collections JCM

History C. O. Jeon 10-C-3.

Links

Halomonas cibimaris JCM 16914 is a mesophilic prokaryote that was isolated from Jeotgal, a traditional Korean fermented seafood.

mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 132377

JCM 16914

@ref 20215

Last LPSN update 2025-12-16 10:08:51

Domain Pseudomonadati

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Oceanospirillales

Family Halomonadaceae

Genus Halomonas

Species Halomonas cibimaris

Full scientific name Halomonas cibimaris Jeong et al. 2013

BacDive ID	Other strains from **Halomonas cibimaris** (1)	Type strain
161891	H. cibimaris JCM 16915

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
67770	positive	growth	30	mesophilic

Physiology and metabolism

Observation

67770

Observationquinones: Q-9

Isolation, sampling and environmental information

Isolation

67770

Sample typeJeotgal, a traditional Korean fermented seafood

Taxonmaps

69479

Global distribution of 16S sequence GQ232738 (>99% sequence identity) for Halomonas cibimaris subclade from Microbeatlas

Aquatic Samples	200
Soil Samples	12
Animal Samples	32
Plant Samples	11
Total Samples	255

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM3953704v1 assembly for Halomonas cibimaris JCM 16914	contig	GCA_039537045	657012	59.81

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Halomonas cibimaris strain 10-C-3 16S ribosomal RNA gene, partial sequence	GQ232738	1454		657012

GC content

@ref	GC-content (mol%)	Method
67770	63.2	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Halomonas cibimaris sp. nov., isolated from jeotgal, a traditional Korean fermented seafood.	Jeong SH, Lee JH, Jung JY, Lee SH, Park MS, Jeon CO	Antonie Van Leeuwenhoek	10.1007/s10482-012-9832-x	2012

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Halomonas cibimaris (KACC 14932, JCM 16914)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Observation

Isolation, sampling and environmental information

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_039537045

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

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