Polynucleobacter asymbioticus (JCM 16613)

Name: Polynucleobacter asymbioticus (JCM 16613)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 161837

Type strain

Culture col. no. JCM 16613

NCBI tax ID(s) 576611

Special Collections JCM

History K. Watanabe KF022.

Links

Polynucleobacter asymbioticus JCM 16613 is a mesophilic prokaryote that was isolated from Lake Kasumigaura.

mesophilic 16S sequence

Name and taxonomic classification

SI-ID 133187

JCM 16613

@ref 20215

Last LPSN update 2025-12-16 10:08:50

Domain Pseudomonadati

Phylum Pseudomonadota

Class Betaproteobacteria

Order Burkholderiales

Family Burkholderiaceae

Genus Polynucleobacter

Species Polynucleobacter asymbioticus

Full scientific name Polynucleobacter asymbioticus (Hahn et al. 2009) Hahn et al. 2016

Synonyms (1)

Polynucleobacter necessarius subsp. asymbioticus

BacDive ID	Other strains from **Polynucleobacter asymbioticus** (3)	Type strain
2068	P. asymbioticus QLW-P1DMWA-1, DSM 18221, CIP 109841 (type strain)
161838	P. asymbioticus JCM 16614
161839	P. asymbioticus JCM 16615

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
67770	positive	growth	27	mesophilic

Physiology and metabolism

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
67770	Lake Kasumigaura	Ibaraki Pref.	Japan	JPN	Asia

Taxonmaps

69479

Global distribution of 16S sequence AB269808 (>99% sequence identity) for Polynucleobacter from Microbeatlas

Aquatic Samples	34169
Soil Samples	1815
Animal Samples	6310
Plant Samples	555
Total Samples	42849

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Polynucleobacter sp. gene for 16S rRNA, partial sequence, isolate: KF022	AB269808	1435		576611

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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