Name: Phocaeicola sartorii JCM 16498
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 161796

Type strain:

Species: Phocaeicola sartorii

Culture col. no.: JCM 16498

Strain history: M. Kitahara ST180.

NCBI tax ID(s): 671267 (species)

Other strains from Phocaeicola sartorii

P. sartorii A-C2-0, AC20, DSM 21941, CCUG 57211, ... (type strain)
P. sartorii CLA-AV-12, DSM 110081

Section

Phocaeicola sartorii JCM 16498 is a mesophilic bacterium that was isolated from Chinchilla feces.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Bacteroidia*
	Order	*Bacteroidales*
	Family	*Bacteroidaceae*
	Genus	*Phocaeicola*
	Species	**Phocaeicola sartorii**
	Full Scientific Name (LPSN)	Phocaeicola sartorii (Clavel et al. 2010) García-López et al. 2020

	Synonym	Bacteroides chinchillae
	Synonym	Phocaeicola chinchillae
	Synonym	Bacteroides sartorii

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	37 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Chinchilla feces
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence AB531491 (>99% sequence identity) for Phocaeicola sartorii subclade from Microbeatlas

Aquatic Samples	3072
Soil Samples	1570
Animal Samples	116898
Plant Samples	449
Total Samples	121989

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Bacteroides chinchillae gene for 16S rRNA, partial sequence, strain: JCM 16498	AB531491	1489	ENA	671267 tax ID
[Ref.: #67770]	Bacteroides chinchillae gene for 16S ribosomal RNA, partial sequence	AB547637	1490	ENA	671267 tax ID

[Ref.: #67770]	GC-content	44.4 mol%	high performance liquid chromatography (HPLC)
[Ref.: #67770]	GC-content	45.4 mol%	high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 16498

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Phocaeicola sartorii in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF