Streptomyces mobaraensis IPCR 16-22 is an obligate aerobe, spore-forming, Gram-positive bacterium that builds an aerial mycelium and produces antibiotic compounds and toxins.
antibiotic compound production toxin production spore-forming Gram-positive filament-shaped obligate aerobe genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Kitasatosporales |
| Family Streptomycetaceae |
| Genus Streptomyces |
| Species Streptomyces mobaraensis |
| Full scientific name Streptomyces mobaraensis (Nagatsu and Suzuki 1963) Witt and Stackebrandt 1991 |
| Synonyms (6) |
| BacDive ID | Other strains from Streptomyces mobaraensis (2) | Type strain |
|---|---|---|
| 16162 | S. mobaraensis DSM 40587, ATCC 27441, CBS 777.72, IFO 13476, ... | |
| 16164 | S. mobaraensis B-80-Z2, DSM 40903, ATCC 15003, DSM 41492, ... |
| @ref: | 9846 |
| multimedia content: | DSM_40847-1.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_40847-1.jpg |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref: | 9846 |
| multimedia content: | DSM_40847.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_40847.jpg |
| caption: | Medium 65 28°C |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 9846 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | Medium recipe at MediaDive | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water | ||
| 19493 | ISP 2 | Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes | |||
| 19493 | ISP 3 | Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms: | |||
| 19493 | ISP 4 | Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml | |||
| 19493 | ISP 5 | Name: ISP 5 (5323) Composition L-Asparagine 1.0 g/l Glycerol 10.0 g/l K2HPO4 1.0 g/l Salt solution (see preparation) 1.0 ml/l Agar 20.0 g/l Preparation: Salt solution 1.0 g FeSO4 x 7 H2O 1.0 g MnCl2 x 4 H2O 1.0 g ZNSO4 x 7 H2O in 100 ml water Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.2 Usage: Maintenance and taxonomy Organisms: All Actinomycetes | |||
| 19493 | ISP 6 | Name: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes | |||
| 19493 | ISP 7 | Name: ISP 7 (5322) Composition Glycerol 15.0 g/l L-Tyrosine 0.5 g/l L-Asparagine 1.0 g/l K2HPO4 0.5 g/l NaCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Trace element solution 5343 1.0 ml/l Agar 20.0 Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.3 Usage: Production of melanoid pigments Organisms: All Actinomycetes | |||
| 36693 | MEDIUM 57 - for Streptomyces, Nocardioides, Lentzea albidocapillata and Streptoverticillium reticulum | Distilled water make up to (1000.000 ml);Agar (15.000 g);Glucose (4.000g);Yeast extract (4.000 g);Malt extract (10.000 g);Calcium carbonate (2.000 g) | |||
| 9846 | ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) | Medium recipe at MediaDive | Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water | ||
| 9846 | STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) | Medium recipe at MediaDive | Name: STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) Composition: Agar 14.985 g/l Starch 9.99001 g/l (NH4)2SO4 1.998 g/l CaCO3 1.998 g/l K2HPO4 0.999001 g/l MgSO4 x 7 H2O 0.999001 g/l NaCl 0.999001 g/l FeSO4 x 7 H2O 0.000999001 g/l MnCl2 x 4 H2O 0.000999001 g/l ZnSO4 x 7 H2O 0.000999001 g/l Distilled water | ||
| 120985 | CIP Medium 57 | Medium recipe at CIP |
| @ref | Compound | Percentage | |
|---|---|---|---|
| 19493 | Lysozyme | 1 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 19493 | 22599 ChEBI | arabinose | - | ||
| 68368 | 29016 ChEBI | arginine | - | hydrolysis | from API 20E |
| 19493 | 62968 ChEBI | cellulose | - | ||
| 120985 | 16947 ChEBI | citrate | - | carbon source | |
| 68368 | 16947 ChEBI | citrate | - | assimilation | from API 20E |
| 120985 | 4853 ChEBI | esculin | - | hydrolysis | |
| 19493 | 28757 ChEBI | fructose | - | ||
| 68368 | 5291 ChEBI | gelatin | - | hydrolysis | from API 20E |
| 19493 | 17234 ChEBI | glucose | + | ||
| 120985 | 606565 ChEBI | hippurate | - | hydrolysis | |
| 68368 | 25094 ChEBI | lysine | - | degradation | from API 20E |
| 19493 | 29864 ChEBI | mannitol | - | ||
| 19493 | 17268 ChEBI | myo-inositol | - | ||
| 120985 | 17632 ChEBI | nitrate | - | reduction | |
| 120985 | 17632 ChEBI | nitrate | - | respiration | |
| 120985 | 16301 ChEBI | nitrite | - | reduction | |
| 68368 | 18257 ChEBI | ornithine | - | degradation | from API 20E |
| 19493 | 16634 ChEBI | raffinose | - | ||
| 19493 | 26546 ChEBI | rhamnose | - | ||
| 19493 | 17992 ChEBI | sucrose | - | ||
| 68368 | 27897 ChEBI | tryptophan | - | energy source | from API 20E |
| 68368 | 16199 ChEBI | urea | + | hydrolysis | from API 20E |
| 19493 | 18222 ChEBI | xylose | - |
| @ref | Metabolite | Is sensitive | Is resistant | |
|---|---|---|---|---|
| 120985 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 120985 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 120985 | amylase | - | ||
| 68368 | arginine dihydrolase | - | 3.5.3.6 | from API 20E |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 120985 | beta-galactosidase | + | 3.2.1.23 | |
| 68368 | beta-galactosidase | - | 3.2.1.23 | from API 20E |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 120985 | caseinase | - | 3.4.21.50 | |
| 120985 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | + | 3.4.11.3 | from API zym |
| 120985 | DNase | + | ||
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 120985 | gamma-glutamyltransferase | + | 2.3.2.2 | |
| 120985 | gelatinase | +/- | ||
| 68368 | gelatinase | - | from API 20E | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 120985 | lysine decarboxylase | - | 4.1.1.18 | |
| 68368 | lysine decarboxylase | - | 4.1.1.18 | from API 20E |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 120985 | ornithine decarboxylase | - | 4.1.1.17 | |
| 68368 | ornithine decarboxylase | - | 4.1.1.17 | from API 20E |
| 120985 | oxidase | - | ||
| 120985 | phenylalanine ammonia-lyase | - | 4.3.1.24 | |
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 120985 | tryptophan deaminase | - | ||
| 68368 | tryptophan deaminase | - | 4.1.99.1 | from API 20E |
| 120985 | tween esterase | - | ||
| 120985 | urease | - | 3.5.1.5 | |
| 68368 | urease | + | 3.5.1.5 | from API 20E |
| 68382 | valine arylamidase | + | from API zym |
| @ref | pathway | enzyme coverage | annotated reactions | external links | |
|---|---|---|---|---|---|
| 66794 | valine metabolism | 100 | 9 of 9 | ||
| 66794 | molybdenum cofactor biosynthesis | 100 | 9 of 9 | ||
| 66794 | starch degradation | 100 | 10 of 10 | ||
| 66794 | glycine betaine biosynthesis | 100 | 5 of 5 | ||
| 66794 | formaldehyde oxidation | 100 | 3 of 3 | ||
| 66794 | adipate degradation | 100 | 2 of 2 | ||
| 66794 | coenzyme A metabolism | 100 | 4 of 4 | ||
| 66794 | cis-vaccenate biosynthesis | 100 | 2 of 2 | ||
| 66794 | enterobactin biosynthesis | 100 | 3 of 3 | ||
| 66794 | glycogen metabolism | 100 | 5 of 5 | ||
| 66794 | aspartate and asparagine metabolism | 100 | 9 of 9 | ||
| 66794 | palmitate biosynthesis | 100 | 22 of 22 | ||
| 66794 | cyanate degradation | 100 | 3 of 3 | ||
| 66794 | L-lactaldehyde degradation | 100 | 3 of 3 | ||
| 66794 | aminopropanol phosphate biosynthesis | 100 | 2 of 2 | ||
| 66794 | methylglyoxal degradation | 100 | 5 of 5 | ||
| 66794 | phenylacetate degradation (aerobic) | 100 | 5 of 5 | ||
| 66794 | glycolate and glyoxylate degradation | 100 | 6 of 6 | ||
| 66794 | ppGpp biosynthesis | 100 | 4 of 4 | ||
| 66794 | acetate fermentation | 100 | 4 of 4 | ||
| 66794 | metabolism of amino sugars and derivatives | 100 | 5 of 5 | ||
| 66794 | 1,4-dihydroxy-6-naphthoate biosynthesis | 100 | 6 of 6 | ||
| 66794 | biotin biosynthesis | 100 | 4 of 4 | ||
| 66794 | myo-inositol biosynthesis | 100 | 10 of 10 | ||
| 66794 | CDP-diacylglycerol biosynthesis | 100 | 2 of 2 | ||
| 66794 | anapleurotic synthesis of oxalacetate | 100 | 1 of 1 | ||
| 66794 | taurine degradation | 100 | 1 of 1 | ||
| 66794 | isoleucine metabolism | 100 | 8 of 8 | ||
| 66794 | aerobactin biosynthesis | 100 | 1 of 1 | ||
| 66794 | cellulose degradation | 100 | 5 of 5 | ||
| 66794 | cardiolipin biosynthesis | 100 | 7 of 7 | ||
| 66794 | threonine metabolism | 100 | 10 of 10 | ||
| 66794 | folate polyglutamylation | 100 | 1 of 1 | ||
| 66794 | suberin monomers biosynthesis | 100 | 2 of 2 | ||
| 66794 | UDP-GlcNAc biosynthesis | 100 | 3 of 3 | ||
| 66794 | phenylalanine metabolism | 92.31 | 12 of 13 | ||
| 66794 | pentose phosphate pathway | 90.91 | 10 of 11 | ||
| 66794 | proline metabolism | 90.91 | 10 of 11 | ||
| 66794 | d-mannose degradation | 88.89 | 8 of 9 | ||
| 66794 | serine metabolism | 88.89 | 8 of 9 | ||
| 66794 | chorismate metabolism | 88.89 | 8 of 9 | ||
| 66794 | vitamin B12 metabolism | 88.24 | 30 of 34 | ||
| 66794 | gluconeogenesis | 87.5 | 7 of 8 | ||
| 66794 | dTDPLrhamnose biosynthesis | 87.5 | 7 of 8 | ||
| 66794 | C4 and CAM-carbon fixation | 87.5 | 7 of 8 | ||
| 66794 | peptidoglycan biosynthesis | 86.67 | 13 of 15 | ||
| 66794 | reductive acetyl coenzyme A pathway | 85.71 | 6 of 7 | ||
| 66794 | heme metabolism | 85.71 | 12 of 14 | ||
| 66794 | photosynthesis | 85.71 | 12 of 14 | ||
| 66794 | aclacinomycin biosynthesis | 85.71 | 6 of 7 | ||
| 66794 | ubiquinone biosynthesis | 85.71 | 6 of 7 | ||
| 66794 | glutamate and glutamine metabolism | 85.71 | 24 of 28 | ||
| 66794 | leucine metabolism | 84.62 | 11 of 13 | ||
| 66794 | urea cycle | 84.62 | 11 of 13 | ||
| 66794 | purine metabolism | 84.04 | 79 of 94 | ||
| 66794 | alanine metabolism | 82.76 | 24 of 29 | ||
| 66794 | glycolysis | 82.35 | 14 of 17 | ||
| 66794 | metabolism of disaccharids | 81.82 | 9 of 11 | ||
| 66794 | tryptophan metabolism | 81.58 | 31 of 38 | ||
| 66794 | pyrimidine metabolism | 80 | 36 of 45 | ||
| 66794 | ethylmalonyl-CoA pathway | 80 | 4 of 5 | ||
| 66794 | Entner Doudoroff pathway | 80 | 8 of 10 | ||
| 66794 | factor 420 biosynthesis | 80 | 4 of 5 | ||
| 66794 | hydrogen production | 80 | 4 of 5 | ||
| 66794 | flavin biosynthesis | 80 | 12 of 15 | ||
| 66794 | glutathione metabolism | 78.57 | 11 of 14 | ||
| 66794 | 4-hydroxymandelate degradation | 77.78 | 7 of 9 | ||
| 66794 | CO2 fixation in Crenarchaeota | 77.78 | 7 of 9 | ||
| 66794 | allantoin degradation | 77.78 | 7 of 9 | ||
| 66794 | NAD metabolism | 77.78 | 14 of 18 | ||
| 66794 | histidine metabolism | 75.86 | 22 of 29 | ||
| 66794 | 6-hydroxymethyl-dihydropterin diphosphate biosynthesis | 75 | 6 of 8 | ||
| 66794 | butanoate fermentation | 75 | 3 of 4 | ||
| 66794 | arginine metabolism | 75 | 18 of 24 | ||
| 66794 | sulfopterin metabolism | 75 | 3 of 4 | ||
| 66794 | cyclohexanol degradation | 75 | 3 of 4 | ||
| 66794 | carnitine metabolism | 75 | 6 of 8 | ||
| 66794 | lipid metabolism | 74.19 | 23 of 31 | ||
| 66794 | tetrahydrofolate metabolism | 71.43 | 10 of 14 | ||
| 66794 | citric acid cycle | 71.43 | 10 of 14 | ||
| 66794 | oxidative phosphorylation | 70.33 | 64 of 91 | ||
| 66794 | propionate fermentation | 70 | 7 of 10 | ||
| 66794 | vitamin B1 metabolism | 69.23 | 9 of 13 | ||
| 66794 | methionine metabolism | 69.23 | 18 of 26 | ||
| 66794 | lysine metabolism | 69.05 | 29 of 42 | ||
| 66794 | acetyl CoA biosynthesis | 66.67 | 2 of 3 | ||
| 66794 | octane oxidation | 66.67 | 2 of 3 | ||
| 66794 | cysteine metabolism | 66.67 | 12 of 18 | ||
| 66794 | degradation of aromatic, nitrogen containing compounds | 66.67 | 8 of 12 | ||
| 66794 | IAA biosynthesis | 66.67 | 2 of 3 | ||
| 66794 | acetoin degradation | 66.67 | 2 of 3 | ||
| 66794 | non-pathway related | 65.79 | 25 of 38 | ||
| 66794 | tyrosine metabolism | 64.29 | 9 of 14 | ||
| 66794 | cholesterol biosynthesis | 63.64 | 7 of 11 | ||
| 66794 | degradation of sugar alcohols | 62.5 | 10 of 16 | ||
| 66794 | sulfate reduction | 61.54 | 8 of 13 | ||
| 66794 | isoprenoid biosynthesis | 61.54 | 16 of 26 | ||
| 66794 | lipoate biosynthesis | 60 | 3 of 5 | ||
| 66794 | arachidonate biosynthesis | 60 | 3 of 5 | ||
| 66794 | vitamin K metabolism | 60 | 3 of 5 | ||
| 66794 | 4-hydroxyphenylacetate degradation | 60 | 6 of 10 | ||
| 66794 | gallate degradation | 60 | 3 of 5 | ||
| 66794 | glycine metabolism | 60 | 6 of 10 | ||
| 66794 | 3-chlorocatechol degradation | 60 | 3 of 5 | ||
| 66794 | propanol degradation | 57.14 | 4 of 7 | ||
| 66794 | androgen and estrogen metabolism | 56.25 | 9 of 16 | ||
| 66794 | nitrate assimilation | 55.56 | 5 of 9 | ||
| 66794 | degradation of hexoses | 55.56 | 10 of 18 | ||
| 66794 | daunorubicin biosynthesis | 55.56 | 5 of 9 | ||
| 66794 | phenol degradation | 55 | 11 of 20 | ||
| 66794 | vitamin B6 metabolism | 54.55 | 6 of 11 | ||
| 66794 | phenylpropanoid biosynthesis | 53.85 | 7 of 13 | ||
| 66794 | phosphatidylethanolamine bioynthesis | 53.85 | 7 of 13 | ||
| 66794 | 3-phenylpropionate degradation | 53.33 | 8 of 15 | ||
| 66794 | quinate degradation | 50 | 1 of 2 | ||
| 66794 | lactate fermentation | 50 | 2 of 4 | ||
| 66794 | ketogluconate metabolism | 50 | 4 of 8 | ||
| 66794 | phenylmercury acetate degradation | 50 | 1 of 2 | ||
| 66794 | ribulose monophosphate pathway | 50 | 1 of 2 | ||
| 66794 | ascorbate metabolism | 50 | 11 of 22 | ||
| 66794 | mannosylglycerate biosynthesis | 50 | 1 of 2 | ||
| 66794 | degradation of pentoses | 50 | 14 of 28 | ||
| 66794 | resorcinol degradation | 50 | 1 of 2 | ||
| 66794 | pantothenate biosynthesis | 50 | 3 of 6 | ||
| 66794 | CMP-KDO biosynthesis | 50 | 2 of 4 | ||
| 66794 | ethanol fermentation | 50 | 1 of 2 | ||
| 66794 | glycogen biosynthesis | 50 | 2 of 4 | ||
| 66794 | kanosamine biosynthesis II | 50 | 1 of 2 | ||
| 66794 | polyamine pathway | 47.83 | 11 of 23 | ||
| 66794 | bile acid biosynthesis, neutral pathway | 47.06 | 8 of 17 | ||
| 66794 | d-xylose degradation | 45.45 | 5 of 11 | ||
| 66794 | carotenoid biosynthesis | 45.45 | 10 of 22 | ||
| 66794 | lipid A biosynthesis | 44.44 | 4 of 9 | ||
| 66794 | arachidonic acid metabolism | 44.44 | 8 of 18 | ||
| 66794 | benzoyl-CoA degradation | 42.86 | 3 of 7 | ||
| 66794 | coenzyme M biosynthesis | 40 | 4 of 10 | ||
| 66794 | elloramycin biosynthesis | 40 | 2 of 5 | ||
| 66794 | bacilysin biosynthesis | 40 | 2 of 5 | ||
| 66794 | degradation of sugar acids | 36 | 9 of 25 | ||
| 66794 | sulfoquinovose degradation | 33.33 | 1 of 3 | ||
| 66794 | (5R)-carbapenem carboxylate biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | sphingosine metabolism | 33.33 | 2 of 6 | ||
| 66794 | selenocysteine biosynthesis | 33.33 | 2 of 6 | ||
| 66794 | mevalonate metabolism | 28.57 | 2 of 7 | ||
| 66794 | dolichyl-diphosphooligosaccharide biosynthesis | 27.27 | 3 of 11 | ||
| 66794 | toluene degradation | 25 | 1 of 4 | ||
| 66794 | vitamin E metabolism | 25 | 1 of 4 | ||
| 66794 | methanogenesis from CO2 | 25 | 3 of 12 |
Global distribution of 16S sequence DQ442528 (>99% sequence identity) for Streptomyces from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM1791625v1 assembly for Streptomyces mobaraensis NBRC 13819 = DSM 40847 | complete | 1223523 | 97.53 | ||||
| 67770 | S.mobaraensisn 1.0 assembly for Streptomyces mobaraensis NBRC 13819 = DSM 40847 | contig | 1223523 | 23.4 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 98.00 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 99.40 | no |
| 125439 | motility | BacteriaNetⓘ | no | 85.90 | no |
| 125439 | spore_formation | BacteriaNetⓘ | yes | 88.50 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 88.89 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 96.80 | yes |
| 125438 | aerobic | aerobicⓘ | yes | 86.68 | yes |
| 125438 | spore-forming | spore-formingⓘ | yes | 90.46 | yes |
| 125438 | thermophilic | thermophileⓘ | no | 95.00 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 89.00 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Safety evaluation of the food enzyme protein-glutamine gamma-glutamyltransferase from the non-genetically modified Streptomyces mobaraensis strain M2020197. | EFSA Panel on Food Contact Materials, Enzymes and Processing Aids (CEP), Lambre C, Barat Baviera JM, Bolognesi C, Cocconcelli PS, Crebelli R, Gott DM, Grob K, Lampi E, Mengelers M, Mortensen A, Riviere G, Steffensen IL, Tlustos C, Van Loveren H, Vernis L, Zorn H, Herman L, Roos Y, Aguilera J, Andryszkiewicz M, Cavanna D, Kovalkovicova N, Liu Y, di Piazza G, Chesson A. | EFSA J | 10.2903/j.efsa.2024.8509 | 2024 | ||
| Isolation of Elasnin and Antimycin Derivatives from Syo_1.56 SARP-Expressing Streptomyces sp. RK18-A0406 and Their Biological Activities. | A Abdelhakim I, Futamura Y, Nogawa T, Osada H, Takahashi S. | ACS Omega | 10.1021/acsomega.5c02831 | 2025 | ||
| Pathogenicity | Discovery of Antibiofilm Activity of Elasnin against Marine Biofilms and Its Application in the Marine Antifouling Coatings. | Long L, Wang R, Chiang HY, Ding W, Li YX, Chen F, Qian PY. | Mar Drugs | 10.3390/md19010019 | 2021 | |
| Genome Mining Leads to the Discovery of Kasichelins A-D, Unusual beta-Alanine- and beta-Aminoisobutyric Acid-Containing Siderophores from Streptomyces. | Bader M, Jang S, Stange P, Schmid JC, Grond S, Hughes CC, Kaysser L. | J Nat Prod | 10.1021/acs.jnatprod.5c00461 | 2025 | ||
| Microbiological transglutaminase: Biotechnological application in the food industry. | Kolotylo V, Piwowarek K, Kieliszek M. | Open Life Sci | 10.1515/biol-2022-0737 | 2023 | ||
| Enzymology | The Discovery of Imine Reductases and their Utilisation for the Synthesis of Tetrahydroisoquinolines. | Cardenas-Fernandez M, Roddan R, Carter EM, Hailes HC, Ward JM. | ChemCatChem | 10.1002/cctc.202201126 | 2023 | |
| Pathogenicity | Elasnin Effectively Eradicates Daptomycin-Resistant Methicillin-Resistant Staphylococcus aureus Biofilms. | Sulaiman JE, Long L, Qian PY, Lam H. | Microbiol Spectr | 10.1128/spectrum.02320-21 | 2022 | |
| Pathogenicity | Anti-Larval and Anti-Algal Natural Products from Marine Microorganisms as Sources of Anti-Biofilm Agents. | Wang KL, Dou ZR, Gong GF, Li HF, Jiang B, Xu Y. | Mar Drugs | 10.3390/md20020090 | 2022 | |
| Mode of action of elasnin as biofilm formation eradicator of methicillin-resistant Staphylococcus aureus. | Long L, Sulaiman JE, Xiao Y, Cheng A, Wang R, Malit JJ, Wong WC, Liu W, Li YX, Chen F, Lam H, Qian PY. | Front Microbiol | 10.3389/fmicb.2022.967845 | 2022 | ||
| Metabolism | Site-specific immobilization of endoglycosidases for streamlined chemoenzymatic glycan remodeling of antibodies. | Li T, Li C, Quan DN, Bentley WE, Wang LX. | Carbohydr Res | 10.1016/j.carres.2018.02.007 | 2018 | |
| Metabolism | Enhancement of bleomycin production in Streptomyces verticillus through global metabolic regulation of N-acetylglucosamine and assisted metabolic profiling analysis. | Chen H, Cui J, Wang P, Wang X, Wen J. | Microb Cell Fact | 10.1186/s12934-020-01301-8 | 2020 | |
| Proteomics and Transcriptomics Uncover Key Processes for Elasnin Tolerance in Methicillin-Resistant Staphylococcus aureus. | Sulaiman JE, Long L, Qian PY, Lam H. | mSystems | 10.1128/msystems.01393-21 | 2022 | ||
| Biotechnology | Identification of an unauthorized genetically modified bacteria in food enzyme through whole-genome sequencing. | Fraiture MA, Bogaerts B, Winand R, Deckers M, Papazova N, Vanneste K, De Keersmaecker SCJ, Roosens NHC. | Sci Rep | 10.1038/s41598-020-63987-5 | 2020 | |
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| A novel albumin-based tissue scaffold for autogenic tissue engineering applications. | Li PS, Lee IL, Yu WL, Sun JS, Jane WN, Shen HH. | Sci Rep | 10.1038/srep05600 | 2014 | ||
| Enzymology | pH-dependent activation of Streptomyces hygroscopicus transglutaminase mediated by intein. | Du K, Liu Z, Cui W, Zhou L, Liu Y, Du G, Chen J, Zhou Z. | Appl Environ Microbiol | 10.1128/aem.02820-13 | 2014 | |
| Approaches for peptide and protein cyclisation. | Hayes HC, Luk LYP, Tsai YH. | Org Biomol Chem | 10.1039/d1ob00411e | 2021 | ||
| Genetics | Genomic charting of ribosomally synthesized natural product chemical space facilitates targeted mining. | Skinnider MA, Johnston CW, Edgar RE, Dejong CA, Merwin NJ, Rees PN, Magarvey NA. | Proc Natl Acad Sci U S A | 10.1073/pnas.1609014113 | 2016 | |
| Immobilization of Carbonic Anhydrase in Glass Micropipettes and Glass Fiber Filters for Flow-Through Reactor Applications. | Yoshimoto M, Schweizer T, Rathlef M, Pleij T, Walde P. | ACS Omega | 10.1021/acsomega.8b01517 | 2018 | ||
| Influence of porcine intervertebral disc matrix on stem cell differentiation. | Salzig D, Schmiermund A, Gebauer E, Fuchsbauer HL, Czermak P. | J Funct Biomater | 10.3390/jfb2030155 | 2011 | ||
| DOTA-functionalized polylysine: a high number of DOTA chelates positively influences the biodistribution of enzymatic conjugated anti-tumor antibody chCE7agl. | Grunberg J, Jeger S, Sarko D, Dennler P, Zimmermann K, Mier W, Schibli R. | PLoS One | 10.1371/journal.pone.0060350 | 2013 | ||
| Metabolism | Temporal and spatial regulation of protein cross-linking by the pre-assembled substrates of a Bacillus subtilis spore coat transglutaminase. | Fernandes CG, Martins D, Hernandez G, Sousa AL, Freitas C, Tranfield EM, Cordeiro TN, Serrano M, Moran CP, Henriques AO. | PLoS Genet | 10.1371/journal.pgen.1007912 | 2019 | |
| Metabolism | Low-Fidelity Assembly of Influenza A Virus Promotes Escape from Host Cells. | Vahey MD, Fletcher DA. | Cell | 10.1016/j.cell.2018.10.056 | 2019 | |
| Oxidative cyclizations in orthosomycin biosynthesis expand the known chemistry of an oxygenase superfamily. | McCulloch KM, McCranie EK, Smith JA, Sarwar M, Mathieu JL, Gitschlag BL, Du Y, Bachmann BO, Iverson TM. | Proc Natl Acad Sci U S A | 10.1073/pnas.1500964112 | 2015 | ||
| Gluten-Free Products for Celiac Susceptible People. | Rai S, Kaur A, Chopra CS. | Front Nutr | 10.3389/fnut.2018.00116 | 2018 | ||
| Total synthesis of piericidin A1 and B1 and key analogues. | Schnermann MJ, Romero FA, Hwang I, Nakamaru-Ogiso E, Yagi T, Boger DL. | J Am Chem Soc | 10.1021/ja0632862 | 2006 | ||
| Genetics | Genome-Based Taxonomic Classification of the Phylum Actinobacteria. | Nouioui I, Carro L, Garcia-Lopez M, Meier-Kolthoff JP, Woyke T, Kyrpides NC, Pukall R, Klenk HP, Goodfellow M, Goker M. | Front Microbiol | 10.3389/fmicb.2018.02007 | 2018 | |
| Investigation into experimental toxicological properties of plant protection products having a potential link to Parkinson's disease and childhood leukaemia. | EFSA Panel on Plant Protection Products and their residues (PPR), Ockleford C, Adriaanse P, Berny P, Brock T, Duquesne S, Grilli S, Hernandez-Jerez AF, Bennekou SH, Klein M, Kuhl T, Laskowski R, Machera K, Pelkonen O, Pieper S, Smith R, Stemmer M, Sundh I, Teodorovic I, Tiktak A, Topping CJ, Wolterink G, Angeli K, Fritsche E, Hernandez-Jerez AF, Leist M, Mantovani A, Menendez P, Pelkonen O, Price A, Viviani B, Chiusolo A, Ruffo F, Terron A, Bennekou SH. | EFSA J | 10.2903/j.efsa.2017.4691 | 2017 | ||
| Structure Elucidation, Biosynthetic Gene Cluster Distribution, and Biological Activities of Ketomemicin Analogs in Salinispora. | Castro-Falcon G, Guillen-Matus DG, Silva EBD, Guo W, Ross A, Sa Magalhaes Serafim M, Fernandes THM, Tantillo DJ, O'Donoghue AJ, Jensen PR. | Mar Drugs | 10.3390/md23030126 | 2025 | ||
| Metabolism | Co-cultivation strategies for natural product discovery from actinomycetes: unlocking silent secondary metabolism with mycolic acid-containing bacteria. | Asamizu S. | World J Microbiol Biotechnol | 10.1007/s11274-025-04406-7 | 2025 | |
| Metabolism | Exploring new natural products by utilizing untapped secondary metabolic pathways in actinomycetes. | Hoshino S. | J Nat Med | 10.1007/s11418-025-01903-9 | 2025 | |
| Enzymology | Isoafricanol synthase from Streptomyces malaysiensis. | Rabe P, Samborskyy M, Leadlay PF, Dickschat JS. | Org Biomol Chem | 10.1039/c7ob00234c | 2017 | |
| Enzymology | Oligomycins A and E, major bioactive secondary metabolites produced by Streptomyces sp. strain HG29 isolated from a Saharan soil. | Khebizi N, Boudjella H, Bijani C, Bouras N, Klenk HP, Pont F, Mathieu F, Sabaou N. | J Mycol Med | 10.1016/j.mycmed.2017.10.007 | 2018 | |
| Metabolism | Investigation on antimicrobial agents of the terrestrial Streptomyces sp. BCC71188. | Supong K, Sripreechasak P, Tanasupawat S, Danwisetkanjana K, Rachtawee P, Pittayakhajonwut P. | Appl Microbiol Biotechnol | 10.1007/s00253-016-7804-1 | 2017 | |
| Enzymology | Enzymatic characterization of transglutaminase from Streptomyces mobaraensis DSM 40587 in high salt and effect of enzymatic cross-linking of yak milk proteins on functional properties of stirred yogurt. | Zhang L, Zhang L, Yi H, Du M, Ma C, Han X, Feng Z, Jiao Y, Zhang Y. | J Dairy Sci | 10.3168/jds.2011-5125 | 2012 | |
| Exploring the specialized metabolome of the plant pathogen Streptomyces sp. 11-1-2. | Diaz-Cruz GA, Bignell DRD. | Sci Rep | 10.1038/s41598-024-60630-5 | 2024 | ||
| Pathogenicity | Streptomyces umbrella toxin particles block hyphal growth of competing species. | Zhao Q, Bertolli S, Park YJ, Tan Y, Cutler KJ, Srinivas P, Asfahl KL, Fonesca-Garcia C, Gallagher LA, Li Y, Wang Y, Coleman-Derr D, DiMaio F, Zhang D, Peterson SB, Veesler D, Mougous JD. | Nature | 10.1038/s41586-024-07298-z | 2024 | |
| Genetics | Complete Genome Analysis of Undecylprodigiosin Pigment Biosynthesizing Marine Streptomyces Species Displaying Potential Bioactive Applications. | Ramesh C, Anwesh M, Vinithkumar NV, Kirubagaran R, Dufosse L. | Microorganisms | 10.3390/microorganisms9112249 | 2021 | |
| Optimization of the antifungal metabolite production in Streptomyces libani isolated from northern forests soils in Iran. | Azish M, Shams Ghahfarokhi M, Razzaghi Abyaneh M. | Curr Med Mycol | 10.18502/cmm.6.4.5333 | 2020 | ||
| Research Progress of Natural Active Substances with Immunosuppressive Activity. | Shao F, Shen Q, Yang Z, Yang W, Lu Z, Zheng J, Zhang L, Li H. | Molecules | 10.3390/molecules29102359 | 2024 | ||
| Genetics | Complete genome sequencing and in silico genome mining reveal the promising metabolic potential in Streptomyces strain CS-7. | Alam K, Hao J, Zhong L, Fan G, Ouyang Q, Islam MM, Islam S, Sun H, Zhang Y, Li R, Li A. | Front Microbiol | 10.3389/fmicb.2022.939919 | 2022 | |
| Phylogeny | Potential secondary metabolite from Indonesian Actinobacteria (InaCC A758) against Mycobacterium tuberculosis. | Rakhmawatie MD, Wibawa T, Lisdiyanti P, Pratiwi WR, Damayanti E, Mustofa. | Iran J Basic Med Sci | 10.22038/ijbms.2021.56468.12601 | 2021 | |
| Pathogenicity | Collismycin C from the Micronesian Marine Bacterium Streptomyces sp. MC025 Inhibits Staphylococcus aureus Biofilm Formation. | Lee JH, Kim E, Choi H, Lee J. | Mar Drugs | 10.3390/md15120387 | 2017 | |
| Actinomycetes from the Red Sea Sponge Coscinoderma mathewsi: Isolation, Diversity, and Potential for Bioactive Compounds Discovery. | Shamikh YI, El Shamy AA, Gaber Y, Abdelmohsen UR, Madkour HA, Madkour HA, Horn H, Hassan HM, Elmaidomy AH, Alkhalifah DHM, Hozzein WN. | Microorganisms | 10.3390/microorganisms8050783 | 2020 | ||
| Truncated S-MGBs: towards a parasite-specific and low aggregation chemotype. | Brooke DP, McGee LMC, Giordani F, Cross JM, Khalaf AI, Irving C, Gillingwater K, Shaw CD, Carter KC, Barrett MP, Suckling CJ, Scott FJ. | RSC Med Chem | 10.1039/d1md00110h | 2021 | ||
| Endophytic actinobacteria of a halophytic desert plant Pteropyrum olivieri: promising growth enhancers of sunflower. | Zahra T, Hamedi J, Mahdigholi K. | 3 Biotech | 10.1007/s13205-020-02507-8 | 2020 | ||
| An Integrative Bioinformatic Analysis for Keratinase Detection in Marine-Derived Streptomyces. | Valencia R, Gonzalez V, Undabarrena A, Zamora-Leiva L, Ugalde JA, Camara B. | Mar Drugs | 10.3390/md19060286 | 2021 | ||
| Genetics | Pan-Genome of the Genus Streptomyces and Prioritization of Biosynthetic Gene Clusters With Potential to Produce Antibiotic Compounds. | Caicedo-Montoya C, Manzo-Ruiz M, Rios-Estepa R. | Front Microbiol | 10.3389/fmicb.2021.677558 | 2021 | |
| Pathogenicity | Glutathione S-transferase pi (GST-pi) inhibition and anti-inflammation activity of the ethyl acetate extract of Streptomyces sp. strain MJM 8637. | Lee SK, Lee DR, Choi BK, Palaniyandi SA, Yang SH, Suh JW. | Saudi J Biol Sci | 10.1016/j.sjbs.2015.04.003 | 2015 | |
| Phylogeny | Phylogenetic relationships in the family Streptomycetaceae using multi-locus sequence analysis. | Labeda DP, Dunlap CA, Rong X, Huang Y, Doroghazi JR, Ju KS, Metcalf WW. | Antonie Van Leeuwenhoek | 10.1007/s10482-016-0824-0 | 2017 | |
| Diversity of nonribosomal peptide synthetase and polyketide synthase gene clusters among taxonomically close Streptomyces strains. | Komaki H, Sakurai K, Hosoyama A, Kimura A, Igarashi Y, Tamura T. | Sci Rep | 10.1038/s41598-018-24921-y | 2018 | ||
| Metabolism | Antimicrobial activities of actinomycetes isolated from unexplored regions of Sundarbans mangrove ecosystem. | Sengupta S, Pramanik A, Ghosh A, Bhattacharyya M. | BMC Microbiol | 10.1186/s12866-015-0495-4 | 2015 | |
| Metabolism | Cloning, Expression and Characterization of a Thermostable Esterase HydS14 from Actinomadura sp. Strain S14 in Pichia pastoris. | Sriyapai P, Kawai F, Siripoke S, Chansiri K, Sriyapai T. | Int J Mol Sci | 10.3390/ijms160613579 | 2015 | |
| More P450s Are Involved in Secondary Metabolite Biosynthesis in Streptomyces Compared to Bacillus, Cyanobacteria, and Mycobacterium. | Mnguni FC, Padayachee T, Chen W, Gront D, Yu JH, Nelson DR, Syed K. | Int J Mol Sci | 10.3390/ijms21134814 | 2020 | ||
| Genetics | Genome Mining of Streptomyces sp. YIM 130001 Isolated From Lichen Affords New Thiopeptide Antibiotic. | Schneider O, Simic N, Aachmann FL, Ruckert C, Kristiansen KA, Kalinowski J, Jiang Y, Wang L, Jiang CL, Lale R, Zotchev SB. | Front Microbiol | 10.3389/fmicb.2018.03139 | 2018 | |
| Pilot market surveillance of GMM contaminations in alpha-amylase food enzyme products: A detection strategy strengthened by a newly developed qPCR method targeting a GM Bacillus licheniformis producing alpha-amylase. | Fraiture MA, Gobbo A, Guillitte C, Marchesi U, Verginelli D, De Greve J, D'aes J, Vanneste K, Papazova N, Roosens NHC. | Food Chem (Oxf) | 10.1016/j.fochms.2023.100186 | 2024 | ||
| Biocontrol potential and antifungal mechanism of a novel Streptomyces sichuanensis against Fusarium oxysporum f. sp. cubense tropical race 4 in vitro and in vivo. | Qi D, Zou L, Zhou D, Zhang M, Wei Y, Li K, Zhao Y, Zhang L, Xie J | Appl Microbiol Biotechnol | 10.1007/s00253-022-11788-3 | 2022 | ||
| Metabolism | Features of the transglutaminase-activating metalloprotease from Streptomyces mobaraensis DSM 40847 produced in Escherichia coli. | Juettner NE, Classen M, Colin F, Hoffmann SB, Meyners C, Pfeifer F, Fuchsbauer HL | J Biotechnol | 10.1016/j.jbiotec.2018.07.004 | 2018 | |
| Genetics | Genome Mining of Streptomyces mobaraensis DSM40847 as a Bleomycin Producer Providing a Biotechnology Platform To Engineer Designer Bleomycin Analogues. | Hindra, Yang D, Teng Q, Dong LB, Crnovcic I, Huang T, Ge H, Shen B | Org Lett | 10.1021/acs.orglett.7b00283 | 2017 | |
| Metabolism | Involvement of a Novel Class C Beta-Lactamase in the Transglutaminase Mediated Cross-Linking Cascade of Streptomyces mobaraensis DSM 40847. | Zindel S, Ehret V, Ehret M, Hentschel M, Witt S, Kramer A, Fiebig D, Juttner N, Frols S, Pfeifer F, Fuchsbauer HL | PLoS One | 10.1371/journal.pone.0149145 | 2016 | |
| Biotechnology | Whole-Genome Shotgun Assembly and Analysis of the Genome of Streptomyces mobaraensis DSM 40847, a Strain for Industrial Production of Microbial Transglutaminase. | Yang H, He T, Wu W, Zhu W, Lu B, Sun W | Genome Announc | 10.1128/genomeA.00143-13 | 2013 | |
| Enzymology | Hydroxamate-based colorimetric method for direct screening of transglutaminase-producing bacteria. | Bourneow C, Benjakul S, H-Kittikun A | World J Microbiol Biotechnol | 10.1007/s11274-012-1017-2 | 2012 | |
| Metabolism | Production of transglutaminase by Streptomyces isolates in solid-state fermentation. | Nagy V, Szakacs G | Lett Appl Microbiol | 10.1111/j.1472-765X.2008.02395.x | 2008 | |
| Enzymology | Production of L-leucine aminopeptidase by selected Streptomyces isolates. | Nagy V, Nampoothiri KM, Pandey A, Rahulan R, Szakacs G | J Appl Microbiol | 10.1111/j.1365-2672.2007.03546.x | 2007 | |
| Phylogeny | Taxonomic re-evaluation of whorl-forming Streptomyces (formerly Streptoverticillium) species by using phenotypes, DNA-DNA hybridization and sequences of gyrB, and proposal of Streptomyces luteireticuli (ex Katoh and Arai 1957) corrig., sp. nov., nom. rev. | Hatano K, Nishii T, Kasai H. | Int J Syst Evol Microbiol | 10.1099/ijs.0.02238-0 | 2003 | |
| Phylogeny | Streptomyces yaizuensis sp. nov., a berninamycin C-producing actinomycete isolated from sponge. | Takahashi M, Hoshino K, Hamada M, Tamura T, Moriuchi R, Dohra H, Nakagawa Y, Kokubo S, Yamazaki M, Nakagawa H, Hayakawa M, Kodani S, Yamamura H. | J Antibiot (Tokyo) | 10.1038/s41429-024-00782-8 | 2025 | |
| Phylogeny | Streptomyces swartbergensis sp. nov., a novel tyrosinase and antibiotic producing actinobacterium. | le Roes-Hill M, Prins A, Meyers PR. | Antonie Van Leeuwenhoek | 10.1007/s10482-017-0979-3 | 2018 | |
| Metabolism | Streptomyces hundungensis sp. nov., a novel actinomycete with antifungal activity and plant growth promoting traits. | Nimaichand S, Tamrihao K, Yang LL, Zhu WY, Zhang YG, Li L, Tang SK, Ningthoujam DS, Li WJ. | J Antibiot (Tokyo) | 10.1038/ja.2012.119 | 2013 | |
| Streptomyces rugosispiralis sp. nov., a Novel Actinobacterium Isolated from Peat Swamp Forest Soil That Produces Ansamycin Derivatives and Nocardamines. | Weeraphan T, Supong K, Sripreechasak P, Jutakanoke R, Kowinthanaphat S, Tanasupawat S, Pittayakhajonwut P, Phongsopitanun W. | Antibiotics (Basel) | 10.3390/antibiotics12091467 | 2023 | ||
| Phylogeny | Streptomyces hyderabadensis sp. nov., an actinomycete isolated from soil. | Reddy TVK, Mahmood S, Paris L, Reddy YHK, Wellington EMH, Idris MM. | Int J Syst Evol Microbiol | 10.1099/ijs.0.020446-0 | 2011 | |
| Metabolism | Streptomyces cameroonensis sp. nov., a Geldanamycin Producer That Promotes Theobroma cacao Growth. | Boudjeko T, Tchinda RA, Zitouni M, Nana JA, Lerat S, Beaulieu C. | Microbes Environ | 10.1264/jsme2.me16095 | 2017 | |
| Phylogeny | Identification and Antifungal Mechanism of a Novel Actinobacterium Streptomyces huiliensis sp. nov. Against Fusarium oxysporum f. sp. cubense Tropical Race 4 of Banana. | Qi D, Zou L, Zhou D, Zhang M, Wei Y, Zhang L, Xie J, Wang W | Front Microbiol | 10.3389/fmicb.2021.722661 | 2021 |
| #9846 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40847 |
| #19493 | Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig . |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #36693 | ; Curators of the CIP; |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 ) |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68368 | Automatically annotated from API 20E . |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #120985 | Collection of Institut Pasteur ; Curators of the CIP; CIP 108144 |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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