Name: Virgibacillus siamensis JCM 15395
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 161588

Type strain:

Species: Virgibacillus siamensis

Culture col. no.: JCM 15395, PCU 312, TISTR 1957

Strain history: N. Chamroensaksri and S. Tanasupawat; Chulalongkorn Univ., Thailand; MS3-4.

NCBI tax ID(s): 480071 (species)

Section

Virgibacillus siamensis JCM 15395 is a mesophilic bacterium that was isolated from Fermented fish from a market in Mahasarakram.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Virgibacillus*
	Species	**Virgibacillus siamensis**
	Full Scientific Name (LPSN)	Virgibacillus siamensis Tanasupawat et al. 2011

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	37 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-7

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Fermented fish (pla-ra) from a market in Mahasarakram
[Ref.: #67770]	Host species	pla-ra
[Ref.: #67770]	Country	Thailand
[Ref.: #67770]	Country ISO 3 Code	THA
[Ref.: #67770]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence AB365482 (>99% sequence identity) for Virgibacillus siamensis from Microbeatlas

Aquatic Samples	5
Soil Samples	24
Animal Samples	48
Plant Samples	13
Total Samples	90

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Virgibacillus siamensis gene for 16S rRNA, partial sequence, strain: MS3-4	AB365482	1524	ENA	480071 tax ID

[Ref.: #67770]

GC-content

38 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 15395, PCU 312, TISTR 1957

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Identification of moderately halophilic bacteria from Thai fermented fish ( pla-ra ) and proposal of Virgibacillus siamensis sp. nov.	Tanasupawat S, Chamroensaksri N, Kudo T, Itoh T	J Gen Appl Microbiol	10.2323/jgam.56.369	2010	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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