Bradyrhizobium oligotrophicum (JCM 1498)

Name: Bradyrhizobium oligotrophicum (JCM 1498)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 161560

Type strain

Culture col. no. JCM 1498

NCBI tax ID(s) 44255

Special Collections JCM

Links

Bradyrhizobium oligotrophicum JCM 1498 is a mesophilic prokaryote that was isolated from Paddy field soil in Miyagi Pref..

mesophilic 16S sequence

Name and taxonomic classification

SI-ID 63192

JCM 1498

@ref 20215

Last LPSN update 2025-12-16 10:08:46

Domain Pseudomonadati

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Hyphomicrobiales

Family Nitrobacteraceae

Genus Bradyrhizobium

Species Bradyrhizobium oligotrophicum

Full scientific name Bradyrhizobium oligotrophicum (Ohta and Hattori 1985) Ramírez-Bahena et al. 2013

Synonyms (1)

Agromonas oligotrophica

BacDive ID	Other strains from **Bradyrhizobium oligotrophicum** (5)	Type strain
1784	B. oligotrophicum S58, DSM 12412, ATCC 43045, JCM 1494, LMG ... (type strain)
161555	B. oligotrophicum JCM 1495, NCIMB 12152
161557	B. oligotrophicum JCM 1496
161559	B. oligotrophicum JCM 1497
162162	B. oligotrophicum JCM 18005

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
67770	positive	growth	30	mesophilic

Physiology and metabolism

Observation

67770

Observationquinones: Q-10

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
67770	Paddy field soil in Miyagi Pref.	Japan	JPN	Asia

Taxonmaps

69479

Global distribution of 16S sequence LC379122 (>99% sequence identity) for Bradyrhizobium from Microbeatlas

Aquatic Samples	150
Soil Samples	181
Animal Samples	111
Plant Samples	84
Total Samples	526

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Bradyrhizobium oligotrophicum gene for 16S rRNA, partial sequence, strain: JCM 1498	LC379122	1411		44255

GC content

@ref	GC-content (mol%)	Method
67770	64.7	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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