Name: Streptomyces ardus DSM 40527
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 16146

Type strain:

Species: Streptomyces ardus

Culture col. no.: DSM 40527, ATCC 27417, CBS 731.72, IFO 13430, ISP 5527, JCM 4543, JCM 4722, NBRC 13430, NRRL 2817, RIA 1391, UC 2500, BCRC 12319, CECT 3254, CGMCC 4.1670, CIP 108147, KCTC 9887, NBIMCC 1592, NCB 99, VKM Ac-930, CCRC 12319, KCC S-0722, AS 4.167

Strain history: CIP <- 2003, JCM <- 1983, KCC <- IFO <- SAJ <- ISP <- NRRL <- UC: strain UC 2500

NCBI tax ID(s): 67273 (species)

SI-ID 38996

ATCC 27417, IFO 13430, NRRL2817, JCM 4543, JCM 4722, CCRC 12319, VKM Ac-930, NRRL B-2817, CECT 3254, KCTC 9887, AS 4.167, NBRC 13430, BCRC 12319, CIP 108147, NBIMCC 1592, CGMCC 4.1670, CBS 731.72, DSM 40527

Other strains from Streptomyces ardus

S. ardus DSM 40603, ATCC 27422, CBS 791.72, ...

Section

Streptomyces ardus DSM 40527 is an obligate aerobe, mesophilic, Gram-positive bacterium that builds an aerial mycelium and produces antibiotic compounds.

antibiotic compound production
Gram-positive
rod-shaped
mesophilic
obligate aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces ardus**
	Full Scientific Name (LPSN)	Streptomyces ardus (De Boer et al. 1961) Witt and Stackebrandt 1991

	Synonym	Streptoverticillium ardum
	Synonym	"Streptomyces* ardus"*

Information on morphological and physiological properties Morphology

[Ref.: #116482]	Gram stain	positive

[Ref.: #116482]	Cell shape	rod-shaped

[Ref.: #116482]	Motility	no

[Ref.: #19471]	Colony color	Beige
[Ref.: #19471]	Incubation period	10-14 days
[Ref.: #19471]	Cultivation medium used	ISP 2

[Ref.: #19471]	Colony color	Beige
[Ref.: #19471]	Incubation period	10-14 days
[Ref.: #19471]	Cultivation medium used	ISP 3

[Ref.: #19471]	Colony color	Beige
[Ref.: #19471]	Incubation period	10-14 days
[Ref.: #19471]	Cultivation medium used	ISP 4

[Ref.: #19471]	Colony color	Beige
[Ref.: #19471]	Incubation period	10-14 days
[Ref.: #19471]	Cultivation medium used	ISP 5

[Ref.: #19471]	Colony color	Beige
[Ref.: #19471]	Incubation period	10-14 days
[Ref.: #19471]	Cultivation medium used	ISP 6

[Ref.: #19471]	Colony color	Beige
[Ref.: #19471]	Incubation period	10-14 days
[Ref.: #19471]	Cultivation medium used	ISP 7

[Ref.: #19471]	Multicellular complex forming ability	no
[Ref.: #19471]	Medium Name (multicellularity)	ISP 2

[Ref.: #19471]	Multicellular complex forming ability	no
[Ref.: #19471]	Medium Name (multicellularity)	ISP 3

[Ref.: #19471]	Multicellular complex forming ability	no
[Ref.: #19471]	Medium Name (multicellularity)	ISP 4

[Ref.: #19471]	Multicellular complex forming ability	no
[Ref.: #19471]	Medium Name (multicellularity)	ISP 5

[Ref.: #19471]	Multicellular complex forming ability	yes
[Ref.: #19471]	Multicellular complex name	Aerial Mycelium
[Ref.: #19471]	Medium Name (multicellularity)	ISP 6

[Ref.: #19471]	Multicellular complex forming ability	no
[Ref.: #19471]	Medium Name (multicellularity)	ISP 7

Multimedia content

[Ref.: #9616]

Caption:

Medium 65 28°C

[Ref.: #9616]

Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

[Ref.: #19471]

Culture medium

ISP 2

[Ref.: #19471]

Culture medium growth

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Culture medium composition

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Culture medium

ISP 3

[Ref.: #19471]

Culture medium growth

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Culture medium composition

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Culture medium

ISP 4

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Culture medium growth

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Culture medium composition

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[Ref.: #19471]

Culture medium

ISP 5

[Ref.: #19471]

Culture medium growth

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Culture medium composition

expand / minimize

[Ref.: #19471]

Culture medium

ISP 6

[Ref.: #19471]

Culture medium growth

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Culture medium composition

expand / minimize

[Ref.: #19471]

Culture medium

ISP 7

[Ref.: #19471]

Culture medium growth

[Ref.: #19471]

Culture medium composition

expand / minimize

[Ref.: #33898]

Culture medium

MEDIUM 57 - for Streptomyces, Nocardioides, Lentzea albidocapillata and Streptoverticillium reticulum

[Ref.: #33898]

Culture medium growth

[Ref.: #33898]

Culture medium composition

expand / minimize

[Ref.: #116482]

Culture medium

CIP Medium 57

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Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #19471]		optimum	28 °C
[Ref.: #33898]		growth	30 °C
[Ref.: #67770]		growth	28 °C
[Ref.: #116482]		growth	25-37 °C
[Ref.: #116482]	no	growth	10 °C
[Ref.: #116482]	no	growth	41 °C
[Ref.: #116482]	no	growth	45 °C

[Ref.: #19471]	Temperature range	mesophilic
[Ref.: #33898]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic
[Ref.: #116482]	Temperature range	mesophilic
[Ref.: #116482]	Temperature range	psychrophilic
[Ref.: #116482]	Temperature range	thermophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #116482]

Oxygen tolerance

obligate aerobe

[Ref.: #9616]	Name of produced compound	porfiromycin
[Ref.: #19471]	Name of produced compound	Porfiromycin (Methylmitomycin C)

	Salt	Tested relation		Salt conc.
[Ref.: #116482]	NaCl		growth	0-4	%
[Ref.: #116482]	NaCl	no	growth	6	%
[Ref.: #116482]	NaCl	no	growth	8	%
[Ref.: #116482]	NaCl	no	growth	10	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #19471]	arabinose ChEBI	-
[Ref.: #68368]	arginine ChEBI	+	hydrolysis	* from API 20E
[Ref.: #19471]	cellulose ChEBI	-
[Ref.: #116482]	citrate ChEBI	-	carbon source
[Ref.: #68368]	citrate ChEBI	+	assimilation	* from API 20E
[Ref.: #116482]	esculin ChEBI	-	hydrolysis
[Ref.: #19471]	fructose ChEBI	+
[Ref.: #68368]	gelatin ChEBI	+	hydrolysis	* from API 20E
[Ref.: #19471]	glucose ChEBI	+
[Ref.: #116482]	hippurate ChEBI	+	hydrolysis
[Ref.: #68368]	lysine ChEBI	+	degradation	* from API 20E
[Ref.: #19471]	mannitol ChEBI	-
[Ref.: #19471]	myo-inositol ChEBI	+
[Ref.: #116482]	nitrate ChEBI	-	reduction
[Ref.: #116482]	nitrate ChEBI	-	respiration
[Ref.: #116482]	nitrite ChEBI	-	reduction
[Ref.: #68368]	ornithine ChEBI	+	degradation	* from API 20E
[Ref.: #19471]	raffinose ChEBI	-
[Ref.: #19471]	rhamnose ChEBI	-
[Ref.: #19471]	sucrose ChEBI	-
[Ref.: #68368]	tryptophan ChEBI	-	energy source	* from API 20E
[Ref.: #68368]	urea ChEBI	+	hydrolysis	* from API 20E
[Ref.: #19471]	xylose ChEBI	-
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #116482]	indole ChEBI	no
[Ref.: #67770]	porfiromycin	yes
[Ref.: #68368]	acetoin ChEBI	no	* from API 20E
[Ref.: #68368]	hydrogen sulfide ChEBI	yes	* from API 20E
[Ref.: #68368]	indole ChEBI	no	* from API 20E

	Metabolite	Voges-Proskauer-test	Methylred-test	Indole test
[Ref.: #116482]	acetoin ChEBI	-
[Ref.: #116482]	glucose ChEBI		-
[Ref.: #68368]	acetoin ChEBI	-			* from API 20E
[Ref.: #68368]	indole ChEBI			-	* from API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #116482]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	+	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	+	3.2.1.24	* from API zym
[Ref.: #116482]	amylase	-
[Ref.: #68368]	arginine dihydrolase	+	3.5.3.6	* from API 20E
[Ref.: #116482]	beta-galactosidase	-	3.2.1.23
[Ref.: #68368]	beta-galactosidase	+	3.2.1.23	* from API 20E
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #116482]	caseinase	-	3.4.21.50
[Ref.: #116482]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	+	3.4.11.3	* from API zym
[Ref.: #116482]	DNase	-
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #116482]	gamma-glutamyltransferase	+	2.3.2.2
[Ref.: #116482]	gelatinase	-
[Ref.: #68368]	gelatinase	+		* from API 20E
[Ref.: #116482]	lecithinase	+
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #116482]	lipase	+
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #116482]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68368]	lysine decarboxylase	+	4.1.1.18	* from API 20E
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #116482]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #68368]	ornithine decarboxylase	+	4.1.1.17	* from API 20E
[Ref.: #116482]	oxidase	-
[Ref.: #116482]	phenylalanine ammonia-lyase	-	4.3.1.24
[Ref.: #68382]	trypsin	+	3.4.21.4	* from API zym
[Ref.: #116482]	tryptophan deaminase	-
[Ref.: #68368]	tryptophan deaminase	-	4.1.99.1	* from API 20E
[Ref.: #116482]	tween esterase	-
[Ref.: #116482]	urease	+	3.5.1.5
[Ref.: #68368]	urease	+	3.5.1.5	* from API 20E
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #19471]	331	+	+	+	+	+	+	+	-	-	-	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #116482]	2605	not determinedn.d.	+	+	+	+	+	-	-	-	-	+	+	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	+	-	-	+	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	+	-	-	-	-	-	+	-	+	-	-	+	+	+	-	+	+	-	+	+	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #19471]	371	not determinedn.d.	+	+	+	-	+	+	+	+	+	+	+	-	-	-	+	+	+	+	-
[Ref.: #116482]	10927	-	+	+	+	-	+	+	+	+	+	+	+	-	-	-	+	-	-	+	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #9616]	Sample type/isolated from	soil

[Ref.: #67770]	Sample type/isolated from	Soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	MO
[Ref.: #67770]	Country	USA
[Ref.: #67770]	Country ISO 3 Code	USA
[Ref.: #67770]	Continent	North America

[Ref.: #116482]	Sample type/isolated from	Environment, Soil
[Ref.: #116482]	Geographic location (country and/or sea, region)	Missouri
[Ref.: #116482]	Country	United States of America
[Ref.: #116482]	Country ISO 3 Code	USA
[Ref.: #116482]	Continent	North America
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #9616]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #19471]	Biosafety level	1	Risk group (German classification)
[Ref.: #116482]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Streptomyces ardus strain DSM 40527 16S ribosomal RNA gene, partial sequence	AY999843	1420	ENA	67273 tax ID	*
[Ref.: #20218]	Streptomyces ardus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4543	D44223	120	ENA	67273 tax ID	*
[Ref.: #20218]	Streptomyces ardus gene for 16S rRNA, partial sequence, strain: NBRC 13430	AB184864	1457	ENA	67273 tax ID	*

Availability in culture collections External links

[Ref.: #9616]

Culture collection no.

DSM 40527, ATCC 27417, CBS 731.72, IFO 13430, ISP 5527, JCM 4543, JCM 4722, NBRC 13430, NRRL 2817, RIA 1391, UC 2500, BCRC 12319, CECT 3254, CGMCC 4.1670, CIP 108147, KCTC 9887, NBIMCC 1592, NCB 99, VKM Ac-930, CCRC 12319, KCC S-0722, AS 4.167

[Ref.: #85211]

SI-ID 38996

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Production and biological activity of laidlomycin, anti-MRSA/VRE antibiotic from Streptomyces sp. CS684.	Yoo JC, Kim JH, Ha JW, Park NS, Sohng JK, Lee JW, Park SC, Kim MS, Seong CN	J Microbiol	2499	2007	*

References

#9616

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40527

#19471

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#33898 ; Curators of the CIP;
#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68368

Automatically annotated from API 20E .

#68382

Automatically annotated from API zym .

#85211

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID38996.1 )

#116482 Collection of Institut Pasteur ; Curators of the CIP; CIP 108147
* These data were automatically processed and therefore are not curated

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